Evidence map›Paper›PMID 30763106›Full record

ArticleOrganic letters2019

Elucidation of the Herbicidin Tailoring Pathway Offers Insights into Its Structural Diversity.

Hai-Xue Pan, Zhang Chen, Tianfang Zeng, Wen-Bing Jin, Yujie Geng, Geng-Min Lin, Juan Zhao, Wei-Tao Li, Zijun Xiong, Sheng-Xiong Huang and 3 more

Abstract read
In one paragraph

Article in Organic letters, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.2field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Genomes and secondary metabolomes ofFrontiers in microbiology · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Antibacterial Activity of Aureonuclemycin Produced byMolecules (Basel, Switzerland) · 2022
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Hai-Xue PanState Key Laboratory of Bio-organic and Natural Products Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry , University of Chinese Academy of Sciences (CAS), CAS, Shanghai 200032 , China.
Zhang Chen
Tianfang ZengKey Laboratory of Structure-Based Drug Design & Discovery, Ministry of Education , Shenyang Pharmaceutical University , Shenyang 110016 , China.
Wen-Bing JinState Key Laboratory of Bio-organic and Natural Products Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry , University of Chinese Academy of Sciences (CAS), CAS, Shanghai 200032 , China.
Yujie Geng
Geng-Min Lin
Juan ZhaoState Key Laboratory of Bio-organic and Natural Products Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry , University of Chinese Academy of Sciences (CAS), CAS, Shanghai 200032 , China.
Wei-Tao LiState Key Laboratory of Bio-organic and Natural Products Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry , University of Chinese Academy of Sciences (CAS), CAS, Shanghai 200032 , China.
Zijun XiongState Key Laboratory of Phytochemistry and Plant Resources in West China, Center for Excellence in Molecular Plant Sciences , Kunming Institute of Botany , CAS, Kunming 650201 , China.
Sheng-Xiong HuangState Key Laboratory of Phytochemistry and Plant Resources in West China, Center for Excellence in Molecular Plant Sciences , Kunming Institute of Botany , CAS, Kunming 650201 , China.ORCID 0000-0002-3616-8556
Xin ZhaiKey Laboratory of Structure-Based Drug Design & Discovery, Ministry of Education , Shenyang Pharmaceutical University , Shenyang 110016 , China.
Gong-Li TangState Key Laboratory of Bio-organic and Natural Products Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry , University of Chinese Academy of Sciences (CAS), CAS, Shanghai 200032 , China.ORCID 0000-0003-3149-4683
Shanghai Institute of Organic Chemistry · CNThe University of Texas at Austin · USKunming Institute of Botany · CNShenyang Pharmaceutical University · CN

Funding

Three-Membered Ring Metabolites, Inhibition &FormationR01GM040541 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI LIU, HUNG-WEN · 1989 to 2023
$7.4M
Mechanistic Studies of Deoxy Sugar BiosynthesisR01GM035906 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI LIU, HUNG-WEN · 1986 to 2023
$6.1M
NIGMS NIH HHS R01 GM035906NIGMS NIH HHS R01 GM040541
6 · The paper itself

Abstract

The biosynthetic gene clusters for herbicidins ( hbc) and aureonuclemycin ( anm) were identified in Streptomyces sp. KIB-027 and Streptomyces aureus, respectively. The roles of genes possibly involved in post-core-assembly steps in herbicidin biosynthesis in these clusters and a related her cluster were studied. Through systematic gene deletions, structural elucidation of the accumulated intermediates in the mutants, and in vitro verification of the encoded enzymes, the peripheral modification pathway for herbicidin biosynthesis is now fully established.

Indexed as

Anti-Bacterial AgentsMolecular StructurePurine NucleosidesStreptomycesAnti-Bacterial AgentsherbicidinsPurine Nucleosides

Identifiers

PMID30763106
PMCPMC6451440
OpenAlexW2915048576

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.