Evidence map›Paper›PMID 30760782›Full record

ArticleScientific reports2019

Neuronal message passing using Mean-field, Bethe, and Marginal approximations.

Thomas Parr, Dimitrije Markovic, Stefan J Kiebel, Karl J Friston

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In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed.

  1. Article
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  4. The active construction of past episodes.Translational neuroscience · 2026
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  5. SPM-30 years and beyond.Cerebral cortex (New York, N.Y. : 1991) · 2025
    Review
  6. Article
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  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Federated inference and belief sharing.Neuroscience and biobehavioral reviews · 2024
    Review
  14. Article
  15. Article
  16. Article
  17. Active inference and the two-step task.Scientific reports · 2022
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Thomas ParrWellcome Centre for Human Neuroimaging, Institute of Neurology, University College London, London, WC1N 3BG, UK. thomas.parr.12@ucl.ac.uk.
Dimitrije MarkovicChair of Neuroimaging, Psychology Department, Technische Universität Dresden, Dresden, Germany.
Stefan J KiebelChair of Neuroimaging, Psychology Department, Technische Universität Dresden, Dresden, Germany.
Karl J FristonWellcome Centre for Human Neuroimaging, Institute of Neurology, University College London, London, WC1N 3BG, UK.ORCID 0000-0001-7984-8909

Funding

Wellcome TrustWellcome Trust 088130/Z/09/Z
6 · The paper itself

Abstract

Neuronal computations rely upon local interactions across synapses. For a neuronal network to perform inference, it must integrate information from locally computed messages that are propagated among elements of that network. We review the form of two popular (Bayesian) message passing schemes and consider their plausibility as descriptions of inference in biological networks. These are variational message passing and belief propagation - each of which is derived from a free energy functional that relies upon different approximations (mean-field and Bethe respectively). We begin with an overview of these schemes and illustrate the form of the messages required to perform inference using Hidden Markov Models as generative models. Throughout, we use factor graphs to show the form of the generative models and of the messages they entail. We consider how these messages might manifest neuronally and simulate the inferences they perform. While variational message passing offers a simple and neuronally plausible architecture, it falls short of the inferential performance of belief propagation. In contrast, belief propagation allows exact computation of marginal posteriors at the expense of the architectural simplicity of variational message passing. As a compromise between these two extremes, we offer a third approach - marginal message passing - that features a simple architecture, while approximating the performance of belief propagation. Finally, we link formal considerations to accounts of neurological and psychiatric syndromes in terms of aberrant message passing.

Identifiers

PMID30760782
PMCPMC6374414

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.