Evidence map›Paper›PMID 30759808›Full record

ArticleMarine drugs2019

In Silico Identification and Experimental Validation of (-)-Muqubilin A, a Marine Norterpene Peroxide, as PPARα/γ-RXRα Agonist and RARα Positive Allosteric Modulator.

Enrico D'Aniello, Fabio Arturo Iannotti, Lauren G Falkenberg, Andrea Martella, Alessandra Gentile, Fabrizia De Maio, Maria Letizia Ciavatta, Margherita Gavagnin, Joshua S Waxman, Vincenzo Di Marzo and 2 more

Open access · goldAbstract read
In one paragraph

Article in Marine drugs, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Catalytic Cross-Metathesis Reactions That AffordJournal of the American Chemical Society · 2023
    Article
  5. Review
  6. Article
  7. Marine Terpenic Endoperoxides.Marine drugs · 2021
    Review
  8. Natural Products from Tongan Marine Organisms.Molecules (Basel, Switzerland) · 2021
    Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Enrico D'AnielloDepartment of Biology and Evolution of Marine Organisms, Stazione Zoologica "Anton Dohrn", 80121 Naples, Italy. enrico.daniello@szn.it.
Fabio Arturo IannottiEndocannabinoid Research Group (ERG), Institute of Biomolecular Chemistry, National Research Council (ICB-CNR), Via Campi Flegrei 34, 80078 Pozzuoli (NA), Italy. fabio.iannotti@icb.cnr.it.ORCID 0000-0003-4480-8370
Lauren G FalkenbergMolecular Cardiovascular Biology Division, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229, USA. lauren.falkenberg@cchmc.org.
Andrea MartellaInstitute of Biomolecular Chemistry, National Research Council (ICB-CNR), Via Campi Flegrei 34, 80078 Pozzuoli (NA), Italy. a.martella@lacdr.leidenuniv.nl.
Alessandra GentileInstitute of Biomolecular Chemistry, National Research Council (ICB-CNR), Via Campi Flegrei 34, 80078 Pozzuoli (NA), Italy. alessandra.gentile@mpi-bn.mpg.de.
Fabrizia De MaioInstitute of Biomolecular Chemistry, National Research Council (ICB-CNR), Via Campi Flegrei 34, 80078 Pozzuoli (NA), Italy. fabriziademaio@yahoo.it.
Maria Letizia CiavattaInstitute of Biomolecular Chemistry, National Research Council (ICB-CNR), Via Campi Flegrei 34, 80078 Pozzuoli (NA), Italy. lciavatta@icb.cnr.it.
Margherita GavagninInstitute of Biomolecular Chemistry, National Research Council (ICB-CNR), Via Campi Flegrei 34, 80078 Pozzuoli (NA), Italy. mgavagnin@icb.cnr.it.
Joshua S WaxmanMolecular Cardiovascular Biology Division, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229, USA. Joshua.Waxman@cchmc.org.ORCID 0000-0002-8132-487X
Vincenzo Di MarzoEndocannabinoid Research Group (ERG), Institute of Biomolecular Chemistry, National Research Council (ICB-CNR), Via Campi Flegrei 34, 80078 Pozzuoli (NA), Italy. vdimarzo@icb.cnr.it.ORCID 0000-0002-1490-3070
Pietro AmodeoInstitute of Biomolecular Chemistry, National Research Council (ICB-CNR), Via Campi Flegrei 34, 80078 Pozzuoli (NA), Italy. pamodeo@icb.cnr.it.ORCID 0000-0002-6439-7575
Rosa Maria VitaleInstitute of Biomolecular Chemistry, National Research Council (ICB-CNR), Via Campi Flegrei 34, 80078 Pozzuoli (NA), Italy. rmvitale@icb.cnr.it.ORCID 0000-0001-9243-1307
Istituto di Chimica Biomolecolare · ITCincinnati Children's Hospital Medical Center · USStazione Zoologica Anton Dohrn · IT

Funding

Medical Scientist Training ProgramT32GM063483 · NIGMS · UNIVERSITY OF CINCINNATI · PI KHURANA HERSHEY, GURJIT K. · 2002 to 2022
$6.7M
Molecular Mechanisms of Atrial Development and RegenerationR01HL137766 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI Joshua Waxman · 2017 to 2026
$3.9M
Coup-tf dependent mechanisms of ventricular and hemangioblast specificationR01HL112893 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI WAXMAN, JOSHUA · 2013 to 2017
$1.7M
Retinoic acid-dependent epigenetic and transcriptional mechanisms controlling heart developmentR01HL141186 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI WAXMAN, JOSHUA · 2018 to 2021
$1.6M
Tpl2 in carcinogenesis-related inflammationR15CA152907 · NCI · AMERICAN UNIVERSITY · PI DECICCO-SKINNER, KATHLEEN LEIGH · 2015 to 2015
$419k
Tpl2 in Carcinogenesis-Related InflammationUA5CA152907 · NCI · AMERICAN UNIVERSITY · PI DECICCO-SKINNER, KATHLEEN LEIGH · 2011 to 2011
$381k
NHLBI NIH HHS R01 HL112893NHLBI NIH HHS R01 HL137766NHLBI NIH HHS R01 HL141186NIGMS NIH HHS T32 GM063483
6 · The paper itself

Abstract

The nuclear receptors (NRs) RARα, RXRα, PPARα, and PPARγ represent promising pharmacological targets for the treatment of neurodegenerative diseases. In the search for molecules able to simultaneously target all the above-mentioned NRs, we screened an in-house developed molecular database using a ligand-based approach, identifying (-)-Muqubilin (Muq), a cyclic peroxide norterpene from a marine sponge, as a potential hit. The ability of this compound to stably and effectively bind these NRs was assessed by molecular docking and molecular dynamics simulations. Muq recapitulated all the main interactions of a canonical full agonist for RXRα and both PPARα and PPARγ, whereas the binding mode toward RARα showed peculiar features potentially impairing its activity as full agonist. Luciferase assays confirmed that Muq acts as a full agonist for RXRα, PPARα, and PPARγ with an activity in the low- to sub-micromolar range. On the other hand, in the case of RAR, a very weak agonist activity was observed in the micromolar range. Quite surprisingly, we found that Muq is a positive allosteric modulator for RARα, as both luciferase assays and in vivo analysis using a zebrafish transgenic retinoic acid (RA) reporter line showed that co-administration of Muq with RA produced a potent synergistic enhancement of RARα activation and RA signaling.

Indexed as

Allosteric RegulationAnimalsAnimals, Genetically ModifiedDrug SynergismHigh-Throughput Screening AssaysHumansLarvaModels, MolecularMolecular Docking SimulationPeroxidesPoriferaPPAR alphaPPAR gammaRetinoic Acid Receptor alphaTerpenesTretinoinmuqubilin APeroxidesPPAR alphaPPAR gammaRetinoic Acid Receptor alphaTerpenesTretinoinnuclear receptor agonistpositive allosteric modulatorvirtual screeningzebrafish models

Identifiers

PMID30759808
PMCPMC6410278
OpenAlexW2913713634

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.