Evidence map›Paper›PMID 30758724›Full record

ArticleFood and environmental virology2019

Critical Evaluation of CrAssphage as a Molecular Marker for Human-Derived Wastewater Contamination in the Aquatic Environment.

Kata Farkas, Evelien M Adriaenssens, David I Walker, James E McDonald, Shelagh K Malham, Davey L Jones

Open access · hybridAbstract read
In one paragraph

Article in Food and environmental virology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
7.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 124 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Tools and methodology toFrontiers in microbiology · 2024
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Kata FarkasSchool of Natural Sciences, Bangor University, Deiniol Road, Bangor, Gwynedd, UK. fkata211@gmail.com.ORCID 0000-0002-7068-3228
Evelien M AdriaenssensMicrobiology Research Group, Institute of Integrative Biology, University of Liverpool, Liverpool, UK.
David I WalkerCentre for Environment, Fisheries and Aquaculture Science, Weymouth, Dorset, UK.
James E McDonaldSchool of Natural Sciences, Bangor University, Deiniol Road, Bangor, Gwynedd, UK.
Shelagh K MalhamSchool of Ocean Sciences, Bangor University, Menai Bridge, Anglesey, UK.
Davey L JonesSchool of Natural Sciences, Bangor University, Deiniol Road, Bangor, Gwynedd, UK.
Bangor University · GBCentre for Environment, Fisheries and Aquaculture Science · GBUniversity of Liverpool · GB

Funding

Natural Environment Research Council NE/M010996/1
6 · The paper itself

Abstract

The discharge of human-derived wastewater represents a major threat to water quality with the potential for waterborne disease outbreaks mainly associated with enteric viruses. To prevent illnesses, indicators associated with fecal contamination are monitored in polluted areas, however, their prevalence often does not correlate well with viral pathogens. In this study, we used crAssphage, a recently discovered human-specific gut-associated bacteriophage, for the surveillance of wastewater-derived viral contamination. Untreated and treated wastewater, surface water, sediment and mussel samples were collected monthly over 1 year from the Conwy River and estuary (UK) and were analyzed for crAssphage marker by quantitative PCR. This is the first long-term catchment-to-coast scale study of environmental crAssphage concentrations. CrAssphage was detected in all sample types and showed no distinct seasonal pattern. CrAssphage concentrations were 2 × 10

Indexed as

AnimalsBivalviaEnterovirusEnvironmental MonitoringFecesGeologic SedimentsHumansRiversSeasonsSewageUnited KingdomWastewaterWater PollutionSewageWastewaterCrAssphageEnteric virusesqPCRShellfish hygieneWastewater pollution

Identifiers

PMID30758724
PMCPMC6513805
OpenAlexW2913003809

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.