Evidence map›Paper›PMID 30758123›Full record

ArticleHead & neck2019

Unique mutation patterns in anaplastic thyroid cancer identified by comprehensive genomic profiling.

Saad A Khan, Bo Ci, Yang Xie, David E Gerber, Muhammad S Beg, Steven I Sherman, Maria E Cabanillas, Naifa L Busaidy, Barbara A Burtness, Andreas M Heilmann and 4 more

Abstract read
In one paragraph

Article in Head & neck, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

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  13. InTERTwined: howCurrent opinion in endocrine and metabolic research · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Saad A KhanDivision of Hematology and Oncology, University of Texas Southwestern Medical Center, Dallas, Texas.ORCID 0000-0002-3440-9774
Bo CiDepartment of Clinical Sciences, University of Texas Southwestern Medical Center, Dallas, Texas.
Yang XieDepartment of Clinical Sciences, University of Texas Southwestern Medical Center, Dallas, Texas.
David E GerberDivision of Hematology and Oncology, University of Texas Southwestern Medical Center, Dallas, Texas.
Muhammad S BegDivision of Hematology and Oncology, University of Texas Southwestern Medical Center, Dallas, Texas.
Steven I ShermanDepartment of Endocrine Neoplasia and Hormonal Disorders, University of Texas MD Anderson Cancer Center, Houston, Texas.
Maria E CabanillasDepartment of Endocrine Neoplasia and Hormonal Disorders, University of Texas MD Anderson Cancer Center, Houston, Texas.ORCID 0000-0002-5124-1811
Naifa L BusaidyDepartment of Endocrine Neoplasia and Hormonal Disorders, University of Texas MD Anderson Cancer Center, Houston, Texas.
Barbara A BurtnessDepartment of Internal Medicine, Yale School of Medicine; Developmental Therapeutics Program, Yale Cancer Center, New Haven, Connecticut.
Andreas M HeilmannFoundation Medicine, Inc., Cambridge, Massachusetts.
Mark BaileyFoundation Medicine, Inc., Cambridge, Massachusetts.
Jeffrey S RossFoundation Medicine, Inc., Cambridge, Massachusetts.
David J SherDepartment of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, Texas.
Siraj M AliFoundation Medicine, Inc., Cambridge, Massachusetts.

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Development of New Cancer Treatments and InvestigatorsK24CA201543 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI GERBER, DAVID ERIC · 2016 to 2020
$737k
NCATS NIH HHS UL1 TR001863NCI NIH HHS K24 CA201543NCI NIH HHS K24CA201543-01
6 · The paper itself

Abstract

introductionAnaplastic thyroid cancer (ATC) is a highly aggressive thyroid cancer. Those ATC with genomic alterations (GAs) in TSC2, ALK, and BRAF may respond to targeted therapies.

methodsComprehensive genomic profiling on 90 ATC specimens identified base substitutions, short insertions and deletions, amplifications, copy number alterations, and genomic rearrangements in up to 315 cancer-related genes and 28 genes commonly rearranged in cancer.

resultsMedian patient age was 65 (range, 33-86) years, 50 patients were male. There was a mean of 4.2 GA per case, range 1-11. The most common GA were TP53 (66%), BRAF (34%), TERT (32%), CDKN2A (32%), and NRAS (26%). BRAF V600E and NRAS/HRAS/KRAS alteration were mutually exclusive. BRAF, CDKN2A, PIK3CA, and JAK2 were more frequent in patients >70 years of age; while myc, PTEN, and NRAS were more common in those ≤50 years.

conclusionATC shows many GA with potential therapeutic significance and suggesting different molecular pathways can lead to ATC.

Indexed as

AdultAgedAged, 80 and overCohort StudiesFemaleGene Expression ProfilingHumansMaleMiddle AgedMutationPrevalenceThyroid Carcinoma, AnaplasticThyroid Neoplasmsanaplasticneoplasmsthyroid

Identifiers

PMID30758123
PMCPMC6542589

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.