Evidence map›Paper›PMID 30753668›Full record

ArticleJournal of experimental botany2019

Mutations in the Arabidopsis ROL17/isopropylmalate synthase 1 locus alter amino acid content, modify the TOR network, and suppress the root hair cell development mutant lrx1.

Myriam Schaufelberger, Florian Galbier, Aline Herger, Rita de Brito Francisco, Stefan Roffler, Gilles Clement, Anouck Diet, Stefan Hörtensteiner, Thomas Wicker, Christoph Ringli

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
8.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 48 citations in OpenAlex.

  1. Review
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  3. Article
  4. Article
  5. Article
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  7. Article
  8. Growing of the TOR world.Journal of experimental botany · 2022
    Article
  9. Review
  10. Review
  11. Review
  12. Photosynthetic assimilation of COProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Contributions of TOR Signaling on Photosynthesis.International journal of molecular sciences · 2021
    Review
  14. A Tour of TOR Complex Signaling in Plants.Trends in biochemical sciences · 2021
    Review
  15. Article
  16. Review
  17. Review
  18. Article
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Myriam SchaufelbergerInstitute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland.
Florian GalbierInstitute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland.
Aline HergerInstitute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland.
Rita de Brito FranciscoInstitute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland.
Stefan RofflerInstitute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland.
Gilles ClementInstitute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland.
Anouck DietInstitute of Plant Sciences Paris-Saclay, CNRS, Université Paris Diderot, INRA, Université Paris Sud, Université d'Evry, Université Paris-Saclay, Rue de Noetzlin, Gif-sur-Yvette, France.
Stefan HörtensteinerInstitute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland.
Thomas WickerInstitute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland.
Christoph RingliInstitute of Plant and Microbial Biology, Zurich-Basel Plant Science Center, University of Zurich, Zurich, Switzerland.
University of Zurich · CHCentre National de la Recherche Scientifique · FRUniversité Paris-Sud · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The growth and development of organisms must be tightly controlled and adjusted to nutrient availability and metabolic activities. The Target of Rapamycin (TOR) network is a major control mechanism in eukaryotes and influences processes such as translation, mitochondrial activity, production of reactive oxygen species, and the cytoskeleton. In Arabidopsis thaliana, inhibition of the TOR kinase causes changes in cell wall architecture and suppression of phenotypic defects of the cell wall formation mutant lrx1 (leucine-rich repeat extensin 1). The rol17 (repressor of lrx1 17) mutant was identified as a new suppressor of lrx1 that induces also a short root phenotype. The ROL17 locus encodes isopropylmalate synthase 1, a protein involved in leucine biosynthesis. Dependent on growth conditions, mutations in ROL17 do not necessarily alter the level of leucine, but always cause development of the rol17 mutant phenotypes, suggesting that the mutation does not only influence leucine biosynthesis. Changes in the metabolome of rol17 mutants are also found in plants with inhibited TOR kinase activity. Furthermore, rol17 mutants show reduced sensitivity to the TOR kinase inhibitor AZD-8055, indicating a modified TOR network. Together, these data suggest that suppression of lrx1 by rol17 is the result of an alteration of the TOR network.

Indexed as

Phosphatidylinositol 3-KinasesArabidopsisArabidopsis ProteinsGlucosyltransferasesLeucineMutationOrganogenesis, PlantPhenotypePlant RootsSignal TransductionArabidopsis ProteinsGlucosyltransferasesLeucineLRX1 protein, ArabidopsisPhosphatidylinositol 3-KinasesRHM1 protein, ArabidopsisTOR protein, ArabidopsisArabidopsisAZD-8055extensinIPMS1leucineLRX1rol17rootroot hairTOR

Identifiers

PMID30753668
PMCPMC6463047
OpenAlexW2913721483

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.