Evidence map›Paper›PMID 30747337›Full record

ArticlePlant molecular biology2019

PpCBFs selectively regulate PpDAMs and contribute to the pear bud endodormancy process.

Jianzhao Li, Xinhui Yan, Qinsong Yang, Yunjing Ma, Bo Yang, Juan Tian, Yuanwen Teng, Songling Bai

Abstract read
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In one paragraph

Article in Plant molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
6.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
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  7. Molecular advances in bud dormancy in trees.Journal of experimental botany · 2024
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  12. Downregulation of lncRNAInternational journal of molecular sciences · 2021
    Article
  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Jianzhao LiDepartment of Horticulture, Zhejiang University, Hangzhou, 310058, Zhejiang, People's Republic of China.
Xinhui YanDepartment of Horticulture, Zhejiang University, Hangzhou, 310058, Zhejiang, People's Republic of China.
Qinsong YangDepartment of Horticulture, Zhejiang University, Hangzhou, 310058, Zhejiang, People's Republic of China.
Yunjing MaDepartment of Horticulture, Zhejiang University, Hangzhou, 310058, Zhejiang, People's Republic of China.
Bo YangDepartment of Horticulture, Zhejiang University, Hangzhou, 310058, Zhejiang, People's Republic of China.
Juan TianDangshan County Agriculture Committee, Suzhou, Anhui, 235300, People's Republic of China.
Yuanwen TengDepartment of Horticulture, Zhejiang University, Hangzhou, 310058, Zhejiang, People's Republic of China. ywteng@zju.edu.cn.
Songling BaiDepartment of Horticulture, Zhejiang University, Hangzhou, 310058, Zhejiang, People's Republic of China. songlingbai@zju.edu.cn.ORCID http://orcid.org/0000-0002-8103-3095
Zhejiang University · CNMinistry of Agriculture · IDZhejiang Technical Institute of Economics · CN

Funding

Earmarked Fund for China Agriculture Research System CARS-28Fundamental Research Funds for the Central Universities 2018QNA6022National Natural Science Foundation of China 31501736
6 · The paper itself

Abstract

key messagePpCBF2 directly binds to the promoters of PpCBF3 and PpCBF4 to activate their expressions and selectively regulates PpDAMs during the leaf bud endodormancy process of 'Wonhwang' pear (Pyrus pyrifolia). Endodormancy is critical for temperate plant survival under freezing winter conditions, and low temperature is a vital environmental factor in endodormancy regulation. A C-repeat binding factor (CBF) has been found to regulate important DAM transcription factors during endodormancy in pear (Pyrus pyrifolia). In this study, we analyzed the regulation of pear DAM genes by CBFs in further detail. Four CBF and three DAM genes were identified in the pear cultivar 'Wonhwang'. Under natural conditions, PpDAM1 expression decreased from the start of chilling accumulation, while the other two DAM and three CBF genes peaked during endodormancy release. Under chilling treatment, the expressions of PpDAM1, PpDAM2 and PpCBF1 genes were similar to those under natural conditions. Different biochemical methods revealed that PpCBF2/4 can bind to the promoter of PpDAM1 and activate its expression and that PpCBF1/4 can activate PpDAM3. Interestingly, we found that PpCBF2 can activate PpCBF3/4 transcription by directly binding to their promoters. The ICE-CBF regulon is conserved in some plants; three ICE genes were identified in pear, but their expressions did not obviously change under natural and artificial chilling conditions. On the contrary, the selective transcriptional induction of PpCBFs by PpICE1s was observed in a dual-luciferase assay. Considering all these results, we propose that the PpCBF1-PpDAM2 regulon mainly responds to low temperature during endodormancy regulation, with further post-translational regulation by PpICE3. Our results provide basic information on CBF genes functional redundancy and differentiation and demonstrate that the CBF-DAM signaling pathway is involved in the pear bud endodormancy process.

Indexed as

Gene Expression Regulation, PlantCold TemperatureGenes, PlantMADS Domain ProteinsPlant DormancyPlant ProteinsPromoter Regions, GeneticPyrusSignal TransductionTrans-ActivatorsTranscription FactorsMADS Domain ProteinsPlant ProteinsTrans-ActivatorsTranscription FactorsCBFDAMEndodormancyICEPear

Identifiers

PMID30747337
OpenAlexW2911657433

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.