Evidence map›Paper›PMID 30744547›Full record

ArticleBMC microbiology2019

The study of metabolites from fermentation culture of Alternaria oxytropis.

Runjie Song, Jinglong Wang, Lu Sun, Yajing Zhang, Zhenghui Ren, Baoyu Zhao, Hao Lu

Abstract read
In one paragraph

Article in BMC microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. siRNA-Silencing ofFrontiers in microbiology · 2025
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  4. Profile andHeliyon · 2024
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  9. Recent Developments in Metabolomics Studies of Endophytic Fungi.Journal of fungi (Basel, Switzerland) · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Runjie SongCollege of Veterinary Medicine, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Jinglong WangInstitute of Pratacultural Science, Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, 850000, Tibet, China.
Lu SunCollege of Veterinary Medicine, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Yajing ZhangCollege of Veterinary Medicine, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Zhenghui RenCollege of Veterinary Medicine, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Baoyu ZhaoCollege of Veterinary Medicine, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Hao LuCollege of Veterinary Medicine, Northwest A&F University, Yangling, 712100, Shaanxi, China. luhao@nwsuaf.edu.cn.ORCID 0000-0002-8271-0561

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe indolizidine alkaloid-swainsonine is produced by an endophytic fungus Alternaria oxytropis, which was isolated from locoweeds. Swainsonine has many biological activities such as anti-tumorigenic, anti-viral and bacteriostatic. However, the full complement of metabolites produced by Alternaria oxytropis is not known. This study is a chemical analysis of Alternaria oxytropis metabolites, which not only unravels the potential compounds from the fermentation broth but also in which solvent are they extracted, facilitating industrial application.

resultsAlternaria oxytropis isolated from Oxytropis gansuensis was cultured in Czapek's medium for 30d to collect the fermentation broth. The fermentation broth is treated with methanol and then evaporated to dryness to obtain a concentrate of the fermentation broth. The concentrate is added with water for the subsequent fractional extraction with petroleum ether, chloroform, ethyl acetate and n-butanol. Different fractions of the extract were eluted by wet packing and dry loading. The obtained eluate was combined by TLC to detect the same fraction, and then characterized by GC-MS and LC-MS. The results of GC-MS showed that 105 different compounds existed in the petroleum ether, chloroform, and ethyl acetate phases of Alternaria oxytropis fermentation broth. Moreover, the results of LC-MS indicated that the fermentation broth of Alternaria oxytropis contained five alkaloids, 2-hydroxy-indolizidine, retronecine, lentiginosine, swainsonine and swainsonine N-oxide.

conclusionsIn addition to swainsonine and swainsonine N-oxide, 2-hydroxy-indolizidine, retronecine and lentiginosine were identified as the secondary metabolites of Alternaria oxytropis. Other compounds were also detected including 5,6-dihydroergosterol, eburicol, lanosterol, and L-phenylalanyl-L-proline lactam, which have potential applications as drugs.

Indexed as

FermentationMetabolic Networks and PathwaysAlkaloidsAlternariaAstragalus PlantChromatography, LiquidCulture MediaGas Chromatography-Mass SpectrometryIndustrial MicrobiologyTandem Mass SpectrometryAlkaloidsCulture MediaAlkaloidAlternaria oxytropisEndophytic fungusLocoweedsMetabolites

Identifiers

PMID30744547
PMCPMC6369557

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.