Evidence map›Paper›PMID 30742123›Full record

ArticleNature chemical biology2019

PH-domain-binding inhibitors of nucleotide exchange factor BRAG2 disrupt Arf GTPase signaling.

Agata Nawrotek, Sarah Benabdi, Supaporn Niyomchon, Marie-Hélène Kryszke, Christophe Ginestier, Tatiana Cañeque, Livia Tepshi, Angelica Mariani, Robert P St Onge, Guri Giaever and 5 more

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Nature chemical biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
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  3. The cytokinesis regulator RacGAP1 is a Rac1-specific GAP on membranes.Protein science : a publication of the Protein Society · 2026
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  13. A molten globule ensemble primes Arf1-GDP for the nucleotide switch.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  14. Membrane trafficking alterations in breast cancer progression.Frontiers in cell and developmental biology · 2024
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Agata NawrotekLaboratoire de Biologie et Pharmacologie Appliquée, Ecole normale supérieure Paris-Saclay, Cachan, France.
Sarah BenabdiLaboratoire de Biologie et Pharmacologie Appliquée, Ecole normale supérieure Paris-Saclay, Cachan, France.
Supaporn NiyomchonInstitut Curie, PSL Research University, Chemical Cell Biology Group, Paris, France.
Marie-Hélène KryszkeLaboratoire de Biologie et Pharmacologie Appliquée, Ecole normale supérieure Paris-Saclay, Cachan, France.ORCID http://orcid.org/0000-0001-5103-9501
Christophe GinestierUniversité Aix-Marseille, CNRS, INSERM, Institut Paoli-Calmettes, CRCM, Epithelial Stem Cells and Cancer Team, Marseille, France.
Tatiana CañequeInstitut Curie, PSL Research University, Chemical Cell Biology Group, Paris, France.
Livia TepshiLaboratoire de Biologie et Pharmacologie Appliquée, Ecole normale supérieure Paris-Saclay, Cachan, France.
Angelica MarianiInstitut Curie, PSL Research University, Chemical Cell Biology Group, Paris, France.ORCID http://orcid.org/0000-0002-2547-4224
Robert P St OngeGenome Technology Center, Stanford School of Medicine, Stanford, CA, USA.
Guri GiaeverFaculty of Pharmaceutical Sciences, University of British Columbia, Vancouver, Canada.
Corey NislowFaculty of Pharmaceutical Sciences, University of British Columbia, Vancouver, Canada.
Emmanuelle Charafe-JauffretUniversité Aix-Marseille, CNRS, INSERM, Institut Paoli-Calmettes, CRCM, Epithelial Stem Cells and Cancer Team, Marseille, France.
Raphaël RodriguezInstitut Curie, PSL Research University, Chemical Cell Biology Group, Paris, France.ORCID http://orcid.org/0000-0001-7668-446X
Mahel ZeghoufLaboratoire de Biologie et Pharmacologie Appliquée, Ecole normale supérieure Paris-Saclay, Cachan, France. mahel.zeghouf@ens-paris-saclay.fr.ORCID http://orcid.org/0000-0003-3686-2510
Jacqueline CherfilsLaboratoire de Biologie et Pharmacologie Appliquée, Ecole normale supérieure Paris-Saclay, Cachan, France. jacqueline.cherfils@ens-paris-saclay.fr.ORCID http://orcid.org/0000-0002-8966-3067
Centre National de la Recherche Scientifique · FRÉcole Normale Supérieure Paris-Saclay · FRUniversity of British Columbia · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Peripheral membrane proteins orchestrate many physiological and pathological processes, making regulation of their activities by small molecules highly desirable. However, they are often refractory to classical competitive inhibition. Here, we demonstrate that potent and selective inhibition of peripheral membrane proteins can be achieved by small molecules that target protein-membrane interactions by a noncompetitive mechanism. We show that the small molecule Bragsin inhibits BRAG2-mediated Arf GTPase activation in vitro in a manner that requires a membrane. In cells, Bragsin affects the trans-Golgi network in a BRAG2- and Arf-dependent manner. The crystal structure of the BRAG2-Bragsin complex and structure-activity relationship analysis reveal that Bragsin binds at the interface between the PH domain of BRAG2 and the lipid bilayer to render BRAG2 unable to activate lipidated Arf. Finally, Bragsin affects tumorsphere formation in breast cancer cell lines. Bragsin thus pioneers a novel class of drugs that function by altering protein-membrane interactions without disruption.

Indexed as

ADP-Ribosylation Factor 1Cell Line, TumorGTPase-Activating ProteinsGTP PhosphohydrolasesGuanine Nucleotide Exchange FactorsHeLa CellsHumansLipid BilayersMembrane GlycoproteinsNucleotidesPleckstrin Homology DomainsProtein BindingSignal TransductionStructure-Activity RelationshipSulfotransferasesADP-Ribosylation Factor 1CHST15 protein, humanGTPase-Activating ProteinsGTP PhosphohydrolasesGuanine Nucleotide Exchange FactorsIQSEC1 protein, humanLipid BilayersMembrane GlycoproteinsNucleotidesSulfotransferases

Identifiers

PMID30742123
OpenAlexW2913595764

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.