Evidence map›Paper›PMID 30742119›Full record

ArticleNature medicine2019

Immune and genomic correlates of response to anti-PD-1 immunotherapy in glioblastoma.

Junfei Zhao, Andrew X Chen, Robyn D Gartrell, Andrew M Silverman, Luis Aparicio, Tim Chu, Darius Bordbar, David Shan, Jorge Samanamud, Aayushi Mahajan and 17 more

Erratum issued Registry-linked trialAbstract read
In one paragraph

Article in Nature medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. It is linked to trial NCT05235737 (A Single Center, Open-Label, Randomized Study to Evaluate the Safety and Efficacy of Neoadjuvant and Adjuvant Pembrolizumab on Top of Standard Chemo-Radiotherapy), which is not on this map. Cited by 630 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
630citing papers in PubMed, 4 pooled it
53.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05235737 phase4unknown statusnot on this mapstarted 2022, after this paper: background citation

A Single Center, Open-Label, Randomized Study to Evaluate the Safety and Efficacy of Neoadjuvant and Adjuvant Pembrolizumab on Top of Standard Chemo-Radiotherapy (Stupp Protocol) in Treatment of Patients With Newly Diagnosed Glioblastoma Multiforme (GBM).

TypeinterventionalSponsorMedical University of SilesiaRan2022 to 2026Enrolled36ConditionsNewly Diagnosed GlioblastomaArmsPembrolizumab
3 · Its place in the literature

Who cites it

630 citing papers in PubMed, 4 syntheses or guidelines pooled it, 932 citations in OpenAlex.

  1. Pooled it
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  4. Anti-PD-1 and anti-PD-L1 antibodies for glioma.The Cochrane database of systematic reviews · 2025
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  16. Key regulatory elements of the TGFβ-LRRC15 axis predict disease progression and immunotherapy resistance across cancer types.Proceedings of the National Academy of Sciences of the United States of America · 2026
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570 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

27 authors at 5 institutions in 1 country.

Junfei ZhaoDepartment of Systems Biology, Columbia University, New York, NY, USA.
Andrew X ChenDepartment of Systems Biology, Columbia University, New York, NY, USA.
Robyn D GartrellDepartment of Pediatrics, Pediatric Hematology/Oncology/SCT, Columbia University Irving Medical Center, New York, NY, USA.
Andrew M SilvermanDepartment of Pediatrics, Pediatric Hematology/Oncology/SCT, Columbia University Irving Medical Center, New York, NY, USA.
Luis AparicioDepartment of Systems Biology, Columbia University, New York, NY, USA.
Tim ChuDepartment of Systems Biology, Columbia University, New York, NY, USA.
Darius BordbarDepartment of Pediatrics, Pediatric Hematology/Oncology/SCT, Columbia University Irving Medical Center, New York, NY, USA.
David ShanDepartment of Pediatrics, Pediatric Hematology/Oncology/SCT, Columbia University Irving Medical Center, New York, NY, USA.
Jorge SamanamudDepartment of Neurosurgery, Columbia University, New York, NY, USA.
Aayushi MahajanDepartment of Neurosurgery, Columbia University, New York, NY, USA.
Ioan FilipDepartment of Systems Biology, Columbia University, New York, NY, USA.
Rose OrenbuchDepartment of Systems Biology, Columbia University, New York, NY, USA.
Morgan GoetzDepartment of Biomedical Engineering, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Jonathan T YamaguchiDepartment of Neurological Surgery, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Michael CloneyDepartment of Neurological Surgery, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Craig HorbinskiDepartment of Neurological Surgery, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Rimas V LukasDepartment of Neurology, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Jeffrey RaizerDepartment of Neurology, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Ali I RaeDepartment of Neurological Surgery, Oregon Health & Sciences University, Portland, OR, USA.ORCID http://orcid.org/0000-0003-4907-8055
Jinzhou YuanDepartment of Biomedical Informatics, Columbia University, New York, NY, USA.
Peter CanollDepartment of Pathology and Cell Biology, Columbia University, New York, NY, USA.
Jeffrey N BruceDepartment of Neurosurgery, Columbia University, New York, NY, USA.
Yvonne M SaengerDepartment of Medicine, Hematology/Oncology, Columbia University Irving Medical Center, New York, NY, USA.
Peter SimsDepartment of Biomedical Informatics, Columbia University, New York, NY, USA.
Fabio M IwamotoDepartment of Neurology, College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA. fi2146@cumc.columbia.edu.ORCID http://orcid.org/0000-0003-1397-9927
Adam M SonabendDepartment of Neurological Surgery, Northwestern University Feinberg School of Medicine, Chicago, IL, USA. Adam.Sonabend@nm.org.ORCID http://orcid.org/0000-0002-8347-1945
Raul RabadanDepartment of Systems Biology, Columbia University, New York, NY, USA. rr2579@cumc.columbia.edu.ORCID http://orcid.org/0000-0001-7946-9255
Columbia University · USColumbia University Irving Medical Center · USNorthwestern University · USOregon Health & Science University · USUniversity of North Carolina at Chapel Hill · US

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Daniela E Matei · 1993 to 2026
$153.9M
Clinical and Translational Science AwardUL1TR001873 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI REILLY, MUREDACH P · 2016 to 2025
$99.0M
Northwestern University Clinical and Translational Science Institute (NUCATS)UL1TR001422 · NCATS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI D'AQUILA, RICHARD · 2015 to 2023
$56.8M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007367 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI REINER, STEVEN L · 1985 to 2021
$25.1M
STINGing GBM: A First-in- Man Clinical Trial in Surgical Resectable Recurrent GBMP50CA221747 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Pouya Jamshidi · 2018 to 2026
$21.4M
Topology of Cancer Evolution and HeterogeneityU54CA193313 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI IAVARONE, ANTONIO, RABADAN, RAUL · 2015 to 2020
$10.4M
NRSA Training CoreTL1TR001875 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SPANN, MARISA N, TAYLOR, JACQUELYN Y · 2016 to 2025
$8.9M
Single Cell Analysis of the Infiltrative Margins of Glioblastoma and Post Treatment RecurrenceR01NS103473 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI JEFFREY N BRUCE, Peter Canoll · 2017 to 2026
$4.3M
Identification and modeling of driver genetic modules in glioblastomaR01CA179044 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI IAVARONE, ANTONIO, RABADAN, RAUL · 2014 to 2018
$2.3M
(PQB5) Reconstruction of Evolutionary Networks using Cross-Sectional Genomic DataR01CA185486 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI LASORELLA, ANNA, RABADAN, RAUL · 2014 to 2017
$2.1M
TOP2A effects on transcription in gliomas: implications for personalized therapyDP5OD021356 · OD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SONABEND, ADAM M · 2015 to 2019
$2.0M
Tissue Factor as a Key Determinant of IDH1 Mutant versus IDH1 Wild-type Glioma Thrombosis and MalignancyR01NS102669 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI HORBINSKI, CRAIG MICHAEL · 2017 to 2021
$1.7M
NCATS NIH HHS TL1 TR001875NCATS NIH HHS UL1 TR001422NCATS NIH HHS UL1 TR001873NCI NIH HHS P30 CA060553NCI NIH HHS P50 CA221747NCI NIH HHS R01 CA179044NCI NIH HHS R01 CA185486NCI NIH HHS U54 CA193313NIGMS NIH HHS T32 GM007367NIH HHS DP5 OD021356NINDS NIH HHS R01 NS102669NINDS NIH HHS R01 NS103473
6 · The paper itself

Abstract

Immune checkpoint inhibitors have been successful across several tumor types; however, their efficacy has been uncommon and unpredictable in glioblastomas (GBM), where <10% of patients show long-term responses. To understand the molecular determinants of immunotherapeutic response in GBM, we longitudinally profiled 66 patients, including 17 long-term responders, during standard therapy and after treatment with PD-1 inhibitors (nivolumab or pembrolizumab). Genomic and transcriptomic analysis revealed a significant enrichment of PTEN mutations associated with immunosuppressive expression signatures in non-responders, and an enrichment of MAPK pathway alterations (PTPN11, BRAF) in responders. Responsive tumors were also associated with branched patterns of evolution from the elimination of neoepitopes as well as with differences in T cell clonal diversity and tumor microenvironment profiles. Our study shows that clinical response to anti-PD-1 immunotherapy in GBM is associated with specific molecular alterations, immune expression signatures, and immune infiltration that reflect the tumor's clonal evolution during treatment.

Indexed as

AdultAgedAntibodies, Monoclonal, HumanizedAntineoplastic Agents, ImmunologicalBrain NeoplasmsFemaleGene Expression ProfilingGenomicsGlioblastomaHumansImmune ToleranceLongitudinal StudiesMaleMiddle AgedMutationNivolumabAntibodies, Monoclonal, HumanizedAntineoplastic Agents, ImmunologicalBRAF protein, humanNivolumabpembrolizumabProgrammed Cell Death 1 ReceptorProtein Tyrosine Phosphatase, Non-Receptor Type 11Proto-Oncogene Proteins B-rafPTEN PhosphohydrolasePTEN protein, humanPTPN11 protein, human

Identifiers

PMID30742119
PMCPMC6810613
OpenAlexW2911871569

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.