Evidence map›Paper›PMID 30741989›Full record

ArticleScientific reports2019

Transcriptional responses of wheat roots inoculated with Arthrobacter nitroguajacolicus to salt stress.

Maryam Safdarian, Hossein Askari, Vahid Shariati J, Ghorbanali Nematzadeh

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
18.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 118 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Biology · 2024
    Article
  8. Article
  9. Article
  10. Review
  11. Co-inoculation of the endophytesFrontiers in microbiology · 2024
    Article
  12. Review
  13. Review
  14. Transcriptome Analysis of the Salt-TreatedCurrent issues in molecular biology · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Maryam SafdarianDepartment of Plant Molecular Physiology, Genetics and Agricultural Biotechnology Institute of Tabarestan, Sari Agricultural Sciences and Natural Resources University, Sari, Mazandaran, Iran.
Hossein AskariDepartment of plant sciences and biotechnology, Faculty of life Sciences and Biotechnology, Shahid.Beheshti University, G. C., Tehran, Iran. askarihossein@yahoo.com.
Vahid Shariati JGenome Center, National Institute of Genetic Engineering and Biotechnology, Tehran, Iran. vshariati@nigb.ac.ir.
Ghorbanali NematzadehDepartment of Plant Molecular Physiology, Genetics and Agricultural Biotechnology Institute of Tabarestan, Sari Agricultural Sciences and Natural Resources University, Sari, Mazandaran, Iran.
Sari Agricultural Sciences and Natural Resources University · IRNational Institute of Genetic Engineering and Biotechnology · IRShahid Beheshti University · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is commonly accepted that bacteria actively interact with plant host and have beneficial effects on growth and adaptation and grant tolerance to various biotic and abiotic stresses. However, the mechanisms of plant growth promoting bacteria to communicate and adapt to the plant environment are not well characterized. Among the examined bacteria isolates from different saline soils, Arthrobacter nitroguajacolicus was selected as the best plant growth-promoting bacteria under salt stress. To study the effect of bacteria on wheat tolerance to salinity stress, bread wheat seeds were inoculated with A. nitroguajacolicus and grown under salt stress condition. Comparative transcriptome analysis of inoculated and un-inoculated wheat roots under salt stress showed up-regulation of 152 genes whereas 5 genes were significantly down-regulated. Many genes from phenylpropanoid, flavonoid and terpenoid porphyrin and chlorophyll metabolism, stilbenoid, diarylheptanoid metabolism pathways were differentially expressed within inoculated roots under salt stress. Also, a considerable number of genes encoding secondary metabolites such as phenylpropanoids was detected. They are known to take part in lignin biosynthesis of the cell wall as well as antioxidants.

Indexed as

Transcription, GeneticArthrobacterGenes, PlantPlant RootsSalt StressSalt ToleranceTriticumUp-Regulation

Identifiers

PMID30741989
PMCPMC6370872
OpenAlexW2912042197

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.