Evidence map›Paper›PMID 30741620›Full record

ArticleAutophagy2019

VAMP associated proteins are required for autophagic and lysosomal degradation by promoting a PtdIns4P-mediated endosomal pathway.

Dongxue Mao, Guang Lin, Burak Tepe, Zhongyuan Zuo, Kai Li Tan, Mumine Senturk, Sheng Zhang, Benjamin R Arenkiel, Marco Sardiello, Hugo J Bellen

Open access · bronzeAbstract read
In one paragraph

Article in Autophagy, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 1 pooled it
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 1 synthesis or guideline pooled it, 63 citations in OpenAlex.

  1. Guideline
  2. Review
  3. Article
  4. Article
  5. Phosphatidylinositol 4-phosphate; A minor lipid with multiple personalities.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2025
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Molecular regulation of calcium-sensing receptor (CaSR)-mediated signaling.Chronic diseases and translational medicine · 2024
    Review
  12. ALS-Linked VapB P56S Mutation Alters Neuronal Mitochondrial Turnover at the Synapse.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  13. Article
  14. Article
  15. The endolysosomal pathway and ALS/FTD.Trends in neurosciences · 2023
    Review
  16. Review
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Dongxue Maoa Program in Developmental Biology , Baylor College of Medicine , Houston , TX , USA.ORCID 0000-0002-8443-2833
Guang Linb Department of Molecular and Human Genetics , Baylor College of Medicine , Houston , TX , USA.ORCID 0000-0001-5594-3397
Burak Tepea Program in Developmental Biology , Baylor College of Medicine , Houston , TX , USA.ORCID 0000-0003-4371-2502
Zhongyuan Zuob Department of Molecular and Human Genetics , Baylor College of Medicine , Houston , TX , USA.ORCID 0000-0003-4563-7921
Kai Li Tana Program in Developmental Biology , Baylor College of Medicine , Houston , TX , USA.ORCID 0000-0002-1450-7916
Mumine Senturka Program in Developmental Biology , Baylor College of Medicine , Houston , TX , USA.ORCID 0000-0002-6229-9496
Sheng Zhangc The Brown Foundation Institute of Molecular Medicine , University of Texas McGovern Medical School at Houston , Houston , TX , USA.ORCID 0000-0001-6015-2960
Benjamin R Arenkiela Program in Developmental Biology , Baylor College of Medicine , Houston , TX , USA.ORCID 0000-0001-9047-2420
Marco Sardiellob Department of Molecular and Human Genetics , Baylor College of Medicine , Houston , TX , USA.ORCID 0000-0001-6484-0250
Hugo J Bellena Program in Developmental Biology , Baylor College of Medicine , Houston , TX , USA.ORCID 0000-0001-5992-5989
Baylor College of Medicine · USHoward Hughes Medical Institute · USThe University of Texas MD Anderson Cancer Center · US

Funding

Resource Component: Acquisition, maintenance and distribution of Drosophila stocksP40OD018537 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Annette L. Parks · 2014 to 2026
$13.5M
Steps towards a paternal gene activation therapy for Angelman syndromeU54HD083092 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI NELSON, DAVID LOREN, NEUL, JEFFREY L · 2014 to 2019
$7.8M
Modulation of lysosomal function for the treatment of neuronal ceroid lipofuscinoR01NS079618 · NINDS · WASHINGTON UNIVERSITY · PI SARDIELLO, MARCO · 2012 to 2021
$3.1M
Functional Dissection of Huntington's Disease Protein Huntingtin Using DrosophilaR01NS069880 · NINDS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI ZHANG, SHENG · 2010 to 2014
$1.8M
NICHD NIH HHS U54 HD083092NIH HHS P40 OD018537NINDS NIH HHS R01 NS069880NINDS NIH HHS R01 NS079618
6 · The paper itself

Abstract

Mutations in the ER-associated VAPB/ALS8 protein cause amyotrophic lateral sclerosis and spinal muscular atrophy. Previous studies have argued that ER stress may underlie the demise of neurons. We find that loss of VAP proteins (VAPs) leads to an accumulation of aberrant lysosomes and impairs lysosomal degradation. VAPs mediate ER to Golgi tethering and their loss may affect phosphatidylinositol-4-phosphate (PtdIns4P) transfer between these organelles. We found that loss of VAPs elevates PtdIns4P levels in the Golgi, leading to an expansion of the endosomal pool derived from the Golgi. Fusion of these endosomes with lysosomes leads to an increase in lysosomes with aberrant acidity, contents, and shape. Importantly, reducing PtdIns4P levels with a PtdIns4-kinase (PtdIns4K) inhibitor, or removing a single copy of Rab7, suppress macroautophagic/autophagic degradation defects as well as behavioral defects observed in

Indexed as

AnimalsAutophagosomesAutophagyCarrier ProteinsDrosophilaDrosophila ProteinseIF-2 KinaseEndoplasmic ReticulumEndosomesGolgi ApparatusHEK293 CellsHeLa CellsHumansLysosomal-Associated Membrane Protein 2LysosomesMembrane ProteinsCarrier ProteinsDrosophila ProteinseIF-2 KinaseLysosomal-Associated Membrane Protein 2Membrane Proteinsphosphatidylinositol 4-phosphatePhosphatidylinositol Phosphatesrab7 GTP-Binding Proteinsrab7 GTP-binding proteins, humanrab7 GTP-binding proteins, mouserab GTP-Binding ProteinsR-SNARE ProteinsVap33 protein, DrosophilaVAPA protein, humanVAPB protein, humanVesicular Transport ProteinsALS8autophagyPI4KBVAPA/VAPB

Identifiers

PMID30741620
PMCPMC6613884
OpenAlexW2912445897

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.