Evidence map›Paper›PMID 30740825›Full record

ArticleHuman mutation2019

Clarification of glycosylphosphatidylinositol anchorage of OTOANCORIN and human OTOA variants associated with deafness.

Bong Jik Kim, Dong-Kyu Kim, Jin Hee Han, Jayoung Oh, Ah Reum Kim, Chung Lee, Nayoung Kd Kim, Hye-Rim Park, Min Young Kim, Sejoon Lee and 5 more

Open access · greenAbstract read
In one paragraph

Article in Human mutation, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Genes & diseases · 2025
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  7. A MissenseBioMed research international · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Bong Jik KimDepartment of Otolaryngology - Head and Neck Surgery, Chungnam National University College of Medicine, Daejeon, South Korea.
Dong-Kyu KimDepartment of Neurobiology and Anatomy, University of Utah School of Medicine, Salt Lake City, Utah.
Jin Hee HanDepartment of Otorhinolaryngology - Head and Neck Surgery, Seoul National University Bundang Hospital, Seoul National University College of Medicine, Seongnam, South Korea.
Jayoung OhDepartment of Otorhinolaryngology - Head and Neck Surgery, Seoul National University Bundang Hospital, Seoul National University College of Medicine, Seongnam, South Korea.
Ah Reum KimSamsung Genome Institute, Samsung Medical Center, Seoul, South Korea.
Chung LeeSamsung Genome Institute, Samsung Medical Center, Seoul, South Korea.
Nayoung Kd KimSamsung Genome Institute, Samsung Medical Center, Seoul, South Korea.
Hye-Rim ParkDepartment of Otorhinolaryngology - Head and Neck Surgery, Seoul National University Bundang Hospital, Seoul National University College of Medicine, Seongnam, South Korea.
Min Young KimPrecision Medicine Center, Seoul National University Bundang Hospital, Seongnam, South Korea.
Sejoon LeeDepartment of Otorhinolaryngology - Head and Neck Surgery, Seoul National University Bundang Hospital, Seoul National University College of Medicine, Seongnam, South Korea.
Seungmin LeeDepartment of Otorhinolaryngology - Head and Neck Surgery, Seoul National University Bundang Hospital, Seoul National University College of Medicine, Seongnam, South Korea.
Doo Yi OhDepartment of Otorhinolaryngology - Head and Neck Surgery, Seoul National University Bundang Hospital, Seoul National University College of Medicine, Seongnam, South Korea.
Woong-Yang ParkSamsung Genome Institute, Samsung Medical Center, Seoul, South Korea.
Sungjin ParkDepartment of Neurobiology and Anatomy, University of Utah School of Medicine, Salt Lake City, Utah.
Byung Yoon ChoiDepartment of Otorhinolaryngology - Head and Neck Surgery, Seoul National University Bundang Hospital, Seoul National University College of Medicine, Seongnam, South Korea.ORCID 0000-0001-5125-2118
Seoul National University Bundang Hospital · KRSamsung Medical Center · KRUniversity of Utah · USChungnam National University · KR

Funding

Role of GPI-anchorage in the formation of the Tectorial membraneR21DC016750 · NIDCD · UNIVERSITY OF UTAH · PI PARK, SUNG JIN · 2018 to 2019
$419k
Ministry of Education, Republic of Korea 2017R1D1A1B03034401 to D.Y.O.Ministry of Education, Republic of Korea 2018R1A2B2001054 to B.Y.C.Ministry of Education, Republic of Korea 2018R1D1A1B07046159 to B.J.K.Ministry of Health & Welfare, Republic of Korea HI15C1632 to B.Y.C.Ministry of Health & Welfare, Republic of Korea HI17C0952 to B.Y.C.NIDCD NIH HHS R21 DC016750NIH HHS R21DC016750 to S.P.
6 · The paper itself

Abstract

Otoancorin (OTOA), encoded by OTOA, is required for the development of the tectorial membrane in the inner ear. Mutations in this gene cause nonsyndromic hearing loss (DFNB22). The molecular mechanisms underlying most DFNB22 remain poorly understood. Disruption of glycosylphosphatidylinositol (GPI) anchorage has been assumed to be the pathophysiology mandating experimental validation. From a Korean deaf family, we identified two trans OTOA variants (c.1320 + 5 G > C and p.Gln589ArgfsX55 [NM_144672.3]) . The pathogenic potential of c.1320 + 5 G > C was confirmed by a minigene splicing assay. To experimentally determine the GPI anchorage, wild-type (WT) and mutant OTOA harboring p.Gln589ArgfsX55 were expressed in HEK293T cells. The mutant OTOA with p.Gln589ArgfsX55 resulted in an uncontrolled release of OTOA into the medium in contrast with phosphatidylinositol-specific phospholipase C-induced controlled release of WT OTOA from the cell surface. Together, the results of this reverse translational study confirmed GPI-anchorage of OTOA and showed that downstream sequences from the 589th amino acid are critical for GPI-anchorage.

Indexed as

Genetic VariationAllelesAlternative SplicingBiomarkersGenetic Predisposition to DiseaseGenotypeGlycosylphosphatidylinositolsGPI-Linked ProteinsHearing LossHumansBiomarkersGlycosylphosphatidylinositolsGPI-Linked ProteinsOTOA protein, humandeafnessDFNB22glycosylphosphatidylinositol (GPI)-anchorageOTOAtectorial membrane

Identifiers

PMID30740825
PMCPMC6467692
OpenAlexW2911230071

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.