Evidence map›Paper›PMID 30739247›Full record

ArticleFood and environmental virology2019

An Outbreak of Gastroenteritis Associated with GII.17 Norovirus-Contaminated Secondary Water Supply System in Wuhan, China, 2017.

Xuan Zhou, De-Guang Kong, Jing Li, Bei-Bei Pang, Ying Zhao, Jun-Bo Zhou, Ting Zhang, Jun-Qiang Xu, Nobumichi Kobayashi, Yuan-Hong Wang

Open access · hybridAbstract read
In one paragraph

Article in Food and environmental virology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Review
  5. Article
  6. Review
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Xuan ZhouDivision of Microbiology, Wuhan Centers for Disease Prevention and Control, No. 24 Jianghan North Road, Wuhan, 430015, Hubei, People's Republic of China.
De-Guang KongDivision of Infectious Diseases Control, Wuhan Centers for Disease Prevention and Control, No. 24 Jianghan North Road, Wuhan, 430015, Hubei, People's Republic of China.
Jing LiInstitute of Infectious Diseases Control, Hubei Provincial Center for Disease Control and Prevention, No. 6 Zhuodaoquan North Road, Wuhan, 430079, Hubei, People's Republic of China.
Bei-Bei PangDivision of Microbiology, Wuhan Centers for Disease Prevention and Control, No. 24 Jianghan North Road, Wuhan, 430015, Hubei, People's Republic of China.
Ying ZhaoDivision of Microbiology, Wuhan Centers for Disease Prevention and Control, No. 24 Jianghan North Road, Wuhan, 430015, Hubei, People's Republic of China.
Jun-Bo ZhouDivision of Microbiology, Wuhan Centers for Disease Prevention and Control, No. 24 Jianghan North Road, Wuhan, 430015, Hubei, People's Republic of China.
Ting ZhangInstitute of Infectious Diseases Control, Hubei Provincial Center for Disease Control and Prevention, No. 6 Zhuodaoquan North Road, Wuhan, 430079, Hubei, People's Republic of China.
Jun-Qiang XuInstitute of Infectious Diseases Control, Hubei Provincial Center for Disease Control and Prevention, No. 6 Zhuodaoquan North Road, Wuhan, 430079, Hubei, People's Republic of China.
Nobumichi KobayashiDepartment of Hygiene, Sapporo Medical University School of Medicine, S1 W17, Chuo-Ku, Sapporo, 0608556, Japan.
Yuan-Hong WangDivision of Microbiology, Wuhan Centers for Disease Prevention and Control, No. 24 Jianghan North Road, Wuhan, 430015, Hubei, People's Republic of China. wyuanh1@hotmail.com.
Wuhan Center for Disease Control and Prevention · CNHubei Provincial Center for Disease Control and Prevention · CNNational Institute for Communicable Disease Control and Prevention · CNSapporo Medical University · JP

Funding

Wuhan Medical and Science Research Foundation WG11C04Wuhan Medical and Science Research Foundation WG17B02
6 · The paper itself

Abstract

A gastroenteritis outbreak occurred in a university in May, 2017, Wuhan, China. The epidemiological survey and pathogen analysis were conducted to identify the pathogen and control this outbreak. Feces or anal swabs from individuals, water, and swabs taken from tap surfaces of the secondary water supply system (SWSS) and foods were collected for the detection of viruses and pathogenic enteric bacteria by real-time RT-PCR and culture, respectively. Nucleotide sequences were determined by RT-PCR and direct sequencing. Genotyping, phylogenetic, and recombination analyses were conducted by a web-based genotyping tool, MEGA, and RDP4 programs, respectively. Of 144 individuals enrolled, 75 met the case definitions. The epidemic curve showed one peak of incidence suggesting the most probable spread of a single common source. In total, 33 specimens were collected before disinfection of the SWSS. Of these, norovirus was detected and identified as GII.P17-GII.17 with 100% nucleotide sequence identity among the strains detected in ten students (10/14), a maintenance worker (1/2) dealing with the SWSS, four water samples (4/8), and two swabs taken from tap surfaces (2/3). Pathogens including Vibrio cholerae, Salmonella, Shigella, Vibrio parahaemolyticus, Bacillus cereus, enteropathogenic Escherichia coli, rotavirus, astrovirus, and sapovirus were negative. The GII.17 strains in this outbreak clustered closely in the same branch of the phylogenetic tree, and slightly apart from the strains of other cities in China, neighboring countries and regions, European and American countries. This gastroenteritis outbreak was deduced to be attributed to GII.P17-GII.17 norovirus contamination of the SWSS.

Indexed as

AdolescentAdultCaliciviridae InfectionsChinaDisease OutbreaksFecesFemaleFresh WaterGastroenteritisGenotypeHumansMaleMiddle AgedNorovirusPhylogenyWater PollutionEpidemiologyNorovirusOutbreakPhylogenetic analysisSecondary water supply system

Identifiers

PMID30739247
PMCPMC6513810
OpenAlexW2912063306

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.