Evidence map›Paper›PMID 30738435›Full record

ArticleLipids in health and disease2019

Combining I148M and E167K variants to improve risk prediction for nonalcoholic fatty liver disease in Qingdao Han population, China.

Li-Zhen Chen, Hong-Yun Ding, Shou-Sheng Liu, Qun Liu, Xiang-Jun Jiang, Yong-Ning Xin, Shi-Ying Xuan

Open access · goldAbstract read
In one paragraph

Article in Lipids in health and disease, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 2 pooled it
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 2 syntheses or guidelines pooled it, 12 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Genetic Risk of MASLD in Mongolians: Role ofCurrent issues in molecular biology · 2025
    Article
  4. Review
  5. Article
  6. Mitochondrial Mutations and Genetic Factors Determining NAFLD Risk.International journal of molecular sciences · 2021
    Review
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Li-Zhen ChenCollege of Medicine and Pharmaceutics, Ocean University of China, Qingdao, 266003, China.
Hong-Yun DingDepartment of Gastroenterology, Qingdao Municipal Hospital Group, Qingdao, 266011, China.
Shou-Sheng LiuCentral Laboratories, Qingdao Municipal Hospital Group, Qingdao, 266011, China.
Qun LiuMedical College, Qingdao University, Qingdao, 266021, China.
Xiang-Jun JiangDepartment of Gastroenterology, Qingdao Municipal Hospital Group, Qingdao, 266011, China.
Yong-Ning XinDepartment of Gastroenterology, Qingdao Municipal Hospital Group, Qingdao, 266011, China. xinyongning@163.com.
Shi-Ying XuanCollege of Medicine and Pharmaceutics, Ocean University of China, Qingdao, 266003, China. xuansydxy@163.com.
Qingdao Municipal Hospital · CNQingdao University · CN

Funding

Innovation research fund for new technologies and new projects of Qingdao Municipal Hospital President ZYZJJ-YJ201817National Natural Science Foundation of China 31770837Qingdao Livelihood, Science and Technology Project, China 18-6-1-68-nsh
6 · The paper itself

Abstract

backgroundPNPLA3 I148M variant and TM6SF2 E167K variant are recognized as the major genetic modifiers of nonalcoholic fatty liver disease (NAFLD). The present study sought to evaluate the potential additive effect of the two variants on the risk of NAFLD in Qingdao Han Population, China.

methodsWe genotyped PNPLA3 I148M variant and TM6SF2 E167K variant in a cohort of 512 unrelated NAFLD patients and 451 healthy controls by sequencing and polymerase chain reaction analysis. In addition, serum lipid profiles and liver enzymes were determined by standard clinical laboratory methods.

resultsThe minor allele frequencies were 45.48% for PNPLA3 148 locus G allele and 6.69% for TM6SF2 167 locus T allele. The PNPLA3 I148M variant was significantly associated with the risk of NAFLD in an additive model (CG, OR = 2.092, 95% CI: 1.551-2.820, P = 0.000; GG, OR = 4.566, 95% CI: 3.141-6.638, P = 0.000, respectively). And, our data suggested a strong link between the TM6SF2 E167K variant and the risk of NAFLD in a dominant model (CT + TT, OR = 2.327, 95% CI: 1.542-3.513, P = 0.000). In addition, the increasing of the number of risk alleles were associated with the risk of NAFLD (1 risk allele, OR = 1.687, P = 0.001; 2 risk alleles, OR = 4.326, P = 0.000; 3 risk alleles, OR = 6.018, P = 0.027, respectively).

conclusionsCombining the I148M and E167K variants in a manner of an additive effect could improve risk prediction for NAFLD in a Qingdao Han Population cohort.

trial registrationChinese Clinical Trial Register.gov : ChiCTR1800015426.

Indexed as

AcyltransferasesAsian PeopleCase-Control StudiesChinaFemaleGene FrequencyGenetic Association StudiesGenetic Predisposition to DiseaseGenotypeHumansLipaseMaleMembrane ProteinsNon-alcoholic Fatty Liver DiseasePhospholipases A2, Calcium-IndependentPolymorphism, Single NucleotideAcyltransferasesLipaseMembrane ProteinsPhospholipases A2, Calcium-IndependentPNPLA3 protein, humanTM6SF2 protein, humanAdditive effectNonalcoholic fatty liver diseasePNPLA3TM6SF2

Identifiers

PMID30738435
PMCPMC6368685
OpenAlexW2922453714

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.