Evidence map›Paper›PMID 30737385›Full record

ArticleNature communications2019

Intestinal non-canonical NFκB signaling shapes the local and systemic immune response.

Sadeesh K Ramakrishnan, Huabing Zhang, Xiaoya Ma, Inkyung Jung, Andrew J Schwartz, Daniel Triner, Samantha N Devenport, Nupur K Das, Xiang Xue, Melody Y Zeng and 9 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 88 citations in OpenAlex.

  1. TheCells · 2026
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  10. NF-κB in inflammation and cancer.Cellular & molecular immunology · 2025
    Review
  11. Review
  12. Review
  13. The processedFrontiers in immunology · 2025
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Metal transporter SLC39A14/ZIP14 modulates regulation between the gut microbiome and host metabolism.American journal of physiology. Gastrointestinal and liver physiology · 2023
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 3 institutions in 1 country.

Sadeesh K RamakrishnanDepartment of Medicine, University of Pittsburgh, Pittsburgh, PA, 15261, USA. ramaks@pitt.edu.
Huabing ZhangDepartment of Molecular & Integrative Physiology, University of Michigan, Michigan, MI, 48109, USA.
Xiaoya MaDepartment of Molecular & Integrative Physiology, University of Michigan, Michigan, MI, 48109, USA.
Inkyung JungDepartment of Molecular & Integrative Physiology, University of Michigan, Michigan, MI, 48109, USA.
Andrew J SchwartzDepartment of Molecular & Integrative Physiology, University of Michigan, Michigan, MI, 48109, USA.
Daniel TrinerDepartment of Molecular & Integrative Physiology, University of Michigan, Michigan, MI, 48109, USA.
Samantha N DevenportDepartment of Molecular & Integrative Physiology, University of Michigan, Michigan, MI, 48109, USA.
Nupur K DasDepartment of Molecular & Integrative Physiology, University of Michigan, Michigan, MI, 48109, USA.
Xiang XueDepartment of Molecular & Integrative Physiology, University of Michigan, Michigan, MI, 48109, USA.ORCID http://orcid.org/0000-0003-4704-1814
Melody Y ZengDepartment of Pathology, University of Michigan, Ann Arbor, MI, 48109, USA.
Yinling HuCancer and Inflammation Program, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Frederick, MD, 21702, USA.
Richard M MortensenDepartment of Molecular & Integrative Physiology, University of Michigan, Michigan, MI, 48109, USA.
Joel K GreensonDepartment of Pathology, University of Michigan, Ann Arbor, MI, 48109, USA.
Marilia CascalhoTransplantation Biology, University of Michigan, Ann Arbor, MI, 48109, USA.
Christiane E WobusDepartment of Microbiology and Immunology, University of Michigan, Ann Arbor, MI, 48109, USA.
Justin A ColacinoDepartment of Environmental Health Sciences, University of Michigan, Ann Arbor, MI, 48109, USA.ORCID http://orcid.org/0000-0002-5882-4569
Gabriel NunezDepartment of Pathology, University of Michigan, Ann Arbor, MI, 48109, USA.
Liangyou RuiDepartment of Molecular & Integrative Physiology, University of Michigan, Michigan, MI, 48109, USA.ORCID http://orcid.org/0000-0001-8433-8137
Yatrik M ShahDepartment of Molecular & Integrative Physiology, University of Michigan, Michigan, MI, 48109, USA. shahy@umich.edu.
University of Michigan · USNational Institutes of Health · USUniversity of Pittsburgh · US

Funding

XenograftP30CA046592 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Alexey I Nesvizhskii · 1988 to 2026
$178.2M
University of Michigan Center for Gastrointestinal ResearchP30DK034933 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI OMARY, BISHR · 1986 to 2021
$22.5M
Strategic Vision & Impact on Environmental HealthP30ES017885 · NIEHS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Dana Dolinoy · 2011 to 2026
$21.3M
CELLULAR AND MOLECULAR BIOLOGY AT MICHIGANT32GM007315 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PUTHENVEEDU, MANOJKUMAR A · 1985 to 2021
$12.8M
Translational Research in GI CancerP50CA130810 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BRENNER, DEAN E. · 2010 to 2016
$11.8M
Lung Immunopathology Training Stipend SupplementT32HL007517 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LUKACS, NICHOLAS W · 1985 to 2022
$6.1M
SYTEMS AND INTEGRATIVE BIOLOGYT32GM008322 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LOW, MALCOLM JAMES · 1990 to 2020
$5.7M
Control of iron absorption by intestinal HIF2 in iron and hematological disordersR01DK095201 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SHAH, YATRIK M · 2012 to 2025
$5.7M
The role of HIF2alpha in colon carcinogenesisR01CA148828 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SHAH, YATRIK M · 2010 to 2025
$5.2M
Diversity SupplementR01ES028802 · NIEHS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Justin Adam Colacino · 2018 to 2026
$4.8M
Role of IKKalpha in lymphoid organ developmentZIABC011422 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI HU, YINLING · 2012 to 2025
$4.4M
Role of Immunity and the Microbiota in Enteropathogenic E. coli EradicationR01DK095782 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI NUNEZ, GABRIEL · 2013 to 2022
$3.6M
NCI NIH HHS P30 CA046592NCI NIH HHS P50 CA130810NCI NIH HHS R01 CA148828NHLBI NIH HHS T32 HL007517NIDDK NIH HHS F31 DK116555NIDDK NIH HHS K01 DK114376NIDDK NIH HHS K99 DK110537NIDDK NIH HHS P30 DK034933NIDDK NIH HHS R00 DK110537NIDDK NIH HHS R01 DK091591NIDDK NIH HHS R01 DK095201NIDDK NIH HHS R01 DK095782NIDDK NIH HHS T32 DK094775NIEHS NIH HHS R01 ES028802NIGMS NIH HHS T32 GM007315NIGMS NIH HHS T32 GM008322
6 · The paper itself

Abstract

Microfold cells (M-cells) are specialized cells of the intestine that sample luminal microbiota and dietary antigens to educate the immune cells of the intestinal lymphoid follicles. The function of M-cells in systemic inflammatory responses are still unclear. Here we show that epithelial non-canonical NFkB signaling mediated by NFkB-inducing kinase (NIK) is highly active in intestinal lymphoid follicles, and is required for M-cell maintenance. Intestinal NIK signaling modulates M-cell differentiation and elicits both local and systemic IL-17A and IgA production. Importantly, intestinal NIK signaling is active in mouse models of colitis and patients with inflammatory bowel diseases; meanwhile, constitutive NIK signaling increases the susceptibility to inflammatory injury by inducing ectopic M-cell differentiation and a chronic increase of IL-17A. Our work thus defines an important function of non-canonical NFkB and M-cells in immune homeostasis, inflammation and polymicrobial sepsis.

Indexed as

AnimalsBlotting, WesternB-LymphocytesColitisColonEnzyme-Linked Immunosorbent AssayFlow CytometryHumansImmunoglobulin AInterleukin-17IntestinesMiceNF-kappa BProtein Serine-Threonine KinasesRNA, Ribosomal, 16SSepsisImmunoglobulin AInterleukin-17NF-kappa BProtein Serine-Threonine KinasesRNA, Ribosomal, 16S

Identifiers

PMID30737385
PMCPMC6368617
OpenAlexW2912233211

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.