ArticleApplied and environmental microbiology2019
Clostridium scindens ATCC 35704: Integration of Nutritional Requirements, the Complete Genome Sequence, and Global Transcriptional Responses to Bile Acids.
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Article in Applied and environmental microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.
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0cells of the map it votes in
45citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
45 citing papers in PubMed, 70 citations in OpenAlex.
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- The testobolome in microbial testosterone metabolism and human health.NPJ biofilms and microbiomes · 2026Review
- Microbiota-dependent metabolites - New engine for T cell warriors.Gut microbes · 2025Review
- Defined and refined: development of a minimal medium for Clostridium pasteurianum.Applied microbiology and biotechnology · 2025Article
- The Microbiota-Diet-Immunity Axis in Cancer Care: From Prevention to Treatment Modulation and Survivorship.Nutrients · 2025Review
- Primary Biliary Cholangitis: Immunopathogenesis and the Role of Bile Acid Metabolism in Disease Progression.International journal of molecular sciences · 2025Review
- Pangenome Analysis ofMicroorganisms · 2025Article
- Environmental Stress and the Deterministic Assembly of Bacterial Communities in Daqu: The Role of Amino Acid Content Fluctuations.Foods (Basel, Switzerland) · 2025Article
- Clostridium Scindens Protects Against Vancomycin-Induced Cholestasis and Liver Fibrosis by Activating Intestinal FXR-FGF15/19 Signaling.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025Article
- Clostridium scindens: history and current outlook for a keystone species in the mammalian gut involved in bile acid and steroid metabolism.FEMS microbiology reviews · 2025Review
- Interplay between bile acids, gut microbiota, and the tumor immune microenvironment: mechanistic insights and therapeutic strategies.Frontiers in immunology · 2025Review
- How bile acids and the microbiota interact to shape host immunity.Nature reviews. Immunology · 2024Review
- A small intestinal bile acid modulates the gut microbiome to improve host metabolic phenotypes following bariatric surgery.Cell host & microbe · 2024Article
- Strain-dependent induction of primary bile acid 7-dehydroxylation by cholic acid.BMC microbiology · 2024Article
- The changing metabolic landscape of bile acids - keys to metabolism and immune regulation.Nature reviews. Gastroenterology & hepatology · 2024Review
- Another renaissance for bile acid gastrointestinal microbiology.Nature reviews. Gastroenterology & hepatology · 2024Review
- Curtobacterium salicis sp. nov., isolated from willow tree stems in Washington state.Antonie van Leeuwenhoek · 2024Article
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Corrections and comments
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Authors and funding
16 authors at 5 institutions in 2 countries.
Saravanan Devendran *Microbiome Metabolic Engineering Theme, Carl R. Woese Institute for Genomic Biology, Urbana, Illinois, USA.
Rachana Shrestha *Department of Biological Sciences, Eastern Illinois University, Charleston, Illinois, USA.
João M P AlvesDepartment of Parasitology, Institute of Biomedical Sciences, University of São Paulo, São Paulo, Brazil.
Patricia G WolfDepartment of Animal Sciences, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Lindsey LyMicrobiome Metabolic Engineering Theme, Carl R. Woese Institute for Genomic Biology, Urbana, Illinois, USA.
Alvaro G HernandezKeck Center for Biotechnology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Celia Méndez-GarcíaIndependent Researcher, Boston, Massachusetts, USA.
Ashley InbodenDepartment of Biological Sciences, Eastern Illinois University, Charleston, Illinois, USA.
J'nai WileyDepartment of Biological Sciences, Eastern Illinois University, Charleston, Illinois, USA.
Oindrila PaulDepartment of Biological Sciences, Eastern Illinois University, Charleston, Illinois, USA.
Avery AllenDepartment of Biological Sciences, Eastern Illinois University, Charleston, Illinois, USA.
Emily SpringerDepartment of Biological Sciences, Eastern Illinois University, Charleston, Illinois, USA.
Chris L WrightDivision of Nutritional Sciences, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Christopher J FieldsDivision of Nutritional Sciences, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.
Steven L DanielDepartment of Biological Sciences, Eastern Illinois University, Charleston, Illinois, USA.
Jason M RidlonMicrobiome Metabolic Engineering Theme, Carl R. Woese Institute for Genomic Biology, Urbana, Illinois, USA jmridlon@illinois.edu.
Eastern Illinois University · USUniversity of Illinois Urbana-Champaign · USUrbana University · USUniversidade de São Paulo · BRVirginia Commonwealth University · US
Funding
Cancer Health Equity Career Development ProgramT32CA057699 · NCI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI Marian L. Fitzgibbon · 2018 to 2026
$3.0MDiet modulation of bacterial sulfur & bile acid metabolism and colon cancer riskR01CA204808 · NCI · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI GASKINS, REX, MUTLU, ECE A. · 2016 to 2020
$2.0MMicrobial Metabolic Toxicity Drives Colon CancerR01CA179243 · NCI · MAYO CLINIC ROCHESTER · PI CHIA, NICHOLAS · 2014 to 2018
$2.0MNCI NIH HHS R01 CA179243NCI NIH HHS R01 CA204808NCI NIH HHS T32 CA057699
Abstract
In the human gut,
Indexed as
Gastrointestinal MicrobiomeNutritional RequirementsWhole Genome SequencingAmino AcidsBacterial ProteinsBile Acids and SaltsCarbohydrate MetabolismCholic AcidCulture MediaDeoxycholic AcidDNA, BacterialDNA RepairEubacterialesFermentationHumansHydroxylationAmino AcidsBacterial ProteinsBile Acids and SaltsCholic AcidCulture MediaDeoxycholic AcidDNA, Bacterialbile acidClostridium scindensdefined mediumdeoxycholic acidgrowth factor requirementsRNA-Seq
Identifiers
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Textmetadata
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Registered trials
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.