Evidence map›Paper›PMID 30736747›Full record

ArticleBMC genomics2019

Developmental characteristics of pearl oyster Pinctada fucata martensii: insight into key molecular events related to shell formation, settlement and metamorphosis.

Zhe Zheng, Ruijuan Hao, Xinwei Xiong, Yu Jiao, Yuewen Deng, Xiaodong Du

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Zhe ZhengFishery College, Guangdong Ocean University, Zhanjiang, 524088, China.
Ruijuan HaoFishery College, Guangdong Ocean University, Zhanjiang, 524088, China.
Xinwei XiongFishery College, Guangdong Ocean University, Zhanjiang, 524088, China.
Yu JiaoFishery College, Guangdong Ocean University, Zhanjiang, 524088, China.
Yuewen DengFishery College, Guangdong Ocean University, Zhanjiang, 524088, China. dengyw@gdou.edu.cn.ORCID http://orcid.org/0000-0002-4060-2220
Xiaodong DuFishery College, Guangdong Ocean University, Zhanjiang, 524088, China. zjduxd@126.com.
Guangdong Ocean University · CNAgricultural Product Processing Research Institute · CNKey Laboratory of Guangdong Province · CN

Funding

Department of Education of Guangdong Province 2017KCXTD016Modern Agricultural Industrial System CARS-049National Natural Science Foundation of China 31672626Natural Science Foundation of Guangdong Province (CN) 2018A030310666
6 · The paper itself

Abstract

backgroundMarine bivalves undergo complex development processes, such as shell morphology conversion and changes of anatomy and life habits. In this study, the transcriptomes of pearl oyster Pinctada fucata martensii and Pacific oyster Crassostrea gigas at different development stages were analyzed to determine the key molecular events related to shell formation, settlement and metamorphosis.

resultAccording to the shell matrix proteome, biomineralization-related genes exhibited a consensus expression model with the critical stages of shell formation. Differential expression analysis of P. f. martensii, revealed the negative regulation and feedback of extracellular matrixs as well as growth factor pathways involved in shell formation of larvae, similar to that in C. gigas. Furthermore, neuroendocrine pathways in hormone receptors, neurotransmitters and neuropeptide receptors were involved in shell formation, settlement and metamorphosis.

conclusionOur research demonstrated the main clusters of regulation elements related to shell formation, settlement and metamorphosis. The regulation of shell formation and metamorphosis could be coupled forming the neuroendocrine-biomineralization crosstalk in metamorphosis. These findings could provide new insights into the regulation in bivalve development.

Indexed as

GenomicsAnimalsAnimal ShellsExtracellular MatrixGene Expression ProfilingGene OntologyMetamorphosis, BiologicalNeurosecretory SystemsPinctadaMetamorphosisMolecular eventsSettlementShell formation

Identifiers

PMID30736747
PMCPMC6368781
OpenAlexW2922559736

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.