Evidence map›Paper›PMID 30735559›Full record

ArticlePloS one2019

The organization of leukotriene biosynthesis on the nuclear envelope revealed by single molecule localization microscopy and computational analyses.

Angela B Schmider, Melissa Vaught, Nicholas C Bauer, Hunter L Elliott, Matthew D Godin, Giorgianna E Ellis, Peter A Nigrovic, Roy J Soberman

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Angela B SchmiderNephrology Division, Department of Medicine, Massachusetts General Hospital and Harvard Medical School, Boston, MA, United States of America.
Melissa VaughtNephrology Division, Department of Medicine, Massachusetts General Hospital and Harvard Medical School, Boston, MA, United States of America.
Nicholas C BauerNephrology Division, Department of Medicine, Massachusetts General Hospital and Harvard Medical School, Boston, MA, United States of America.ORCID 0000-0002-8513-4467
Hunter L ElliottImage and Data Analysis Core, Department of Cell Biology, Harvard Medical School, Boston, MA, United States of America.
Matthew D GodinNephrology Division, Department of Medicine, Massachusetts General Hospital and Harvard Medical School, Boston, MA, United States of America.
Giorgianna E EllisNephrology Division, Department of Medicine, Massachusetts General Hospital and Harvard Medical School, Boston, MA, United States of America.
Peter A NigrovicDivision of Rheumatology, Immunology and Allergy, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, United States of America.
Roy J SobermanNephrology Division, Department of Medicine, Massachusetts General Hospital and Harvard Medical School, Boston, MA, United States of America.
Harvard University · USBrigham and Women's Hospital · US

Funding

Joint Biology Consortium Resource-based CenterP30AR070253 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI Peter A Nigrovic, Jeffrey Andrew Sparks · 2016 to 2026
$9.4M
TRAINING IN CELL STRUCTURE AND FUNCTION IN NEPHROLOGYT32DK007540 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI BROWN, DENNIS, SOBERMAN, ROY · 1986 to 2021
$7.2M
Role of B7-1 in Podocytes in Pathogenesis of ProteinuriaR01DK062472 · NIDDK · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI SOBERMAN, ROY · 2004 to 2017
$5.3M
Ly6 family members in neutrophil biologyR01AR065538 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI NIGROVIC, PETER A · 2014 to 2024
$4.0M
The Role of lncRNA MEG3 in Clinically Non-functioning Pituitary AdenomasR01CA193520 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI SOBERMAN, ROY · 2016 to 2020
$1.9M
The Macromolecular Organization of Leukotriene Synthesis and Renal InflammationK01DK089145 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI SCHMIDER, ANGELA BAIR · 2011 to 2015
$798k
A System for FLIM MicroscopyS10RR027931 · NCRR · MASSACHUSETTS GENERAL HOSPITAL · PI SOBERMAN, ROY · 2010 to 2010
$321k
NCI NIH HHS R01 CA193520NCRR NIH HHS S10 RR027931NIAMS NIH HHS P30 AR070253NIAMS NIH HHS R01 AR065538NIDDK NIH HHS K01 DK089145NIDDK NIH HHS R01 DK062472NIDDK NIH HHS T32 DK007540
6 · The paper itself

Abstract

The initial steps in the synthesis of leukotrienes are the translocation of 5-lipoxygenase (5-LO) to the nuclear envelope and its subsequent association with its scaffold protein 5-lipoxygenase-activating protein (FLAP). A major gap in our understanding of this process is the knowledge of how the organization of 5-LO and FLAP on the nuclear envelope regulates leukotriene synthesis. We combined single molecule localization microscopy with Clus-DoC cluster analysis, and also a novel unbiased cluster analysis to analyze changes in the relationships between 5-LO and FLAP in response to activation of RBL-2H3 cells to generate leukotriene C4. We identified the time-dependent reorganization of both 5-LO and FLAP into higher-order assemblies or clusters in response to cell activation via the IgE receptor. Clus-DoC analysis identified a subset of these clusters with a high degree of interaction between 5-LO and FLAP that specifically correlates with the time course of LTC4 synthesis, strongly suggesting their role in the initiation of leukotriene biosynthesis.

Indexed as

5-Lipoxygenase-Activating ProteinsAnimalsArachidonate 5-LipoxygenaseBasophilsCell Line, TumorCluster AnalysisGene Expression RegulationImmunoglobulin ELeukotriene C4Nuclear EnvelopeProtein BindingRatsReceptors, IgESignal TransductionSingle Molecule Imaging5-Lipoxygenase-Activating ProteinsAlox5ap protein, ratArachidonate 5-LipoxygenaseFCER1A protein, ratImmunoglobulin ELeukotriene C4Receptors, IgE

Identifiers

PMID30735559
PMCPMC6368329
OpenAlexW2910668792

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.