Evidence map›Paper›PMID 30733327›Full record

ArticleRNA (New York, N.Y.)2019

High-resolution crystal structures of ribosome-bound chloramphenicol and erythromycin provide the ultimate basis for their competition.

Maxim S Svetlov, Elena Plessa, Chih-Wei Chen, Anthony Bougas, Marios G Krokidis, George P Dinos, Yury S Polikanov

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 67 citations in OpenAlex.

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  4. Cyanobacterium-Biotechnology reports (Amsterdam, Netherlands) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Maxim S Svetlov *Center for Biomolecular Sciences, University of Illinois at Chicago, Chicago, Illinois 60607, USA.ORCID 0000-0003-1459-5685
Elena Plessa *Department of Biochemistry, School of Medicine, University of Patras, 26504 Patras, Greece.ORCID 0000-0003-3079-5062
Chih-Wei ChenDepartment of Biological Sciences, University of Illinois at Chicago, Chicago, Illinois 60607, USA.ORCID 0000-0001-7493-3944
Anthony BougasDepartment of Biochemistry, School of Medicine, University of Patras, 26504 Patras, Greece.ORCID 0000-0002-4859-2055
Marios G KrokidisDepartment of Biochemistry, School of Medicine, University of Patras, 26504 Patras, Greece.ORCID 0000-0002-7001-5078
George P DinosDepartment of Biochemistry, School of Medicine, University of Patras, 26504 Patras, Greece.ORCID 0000-0003-3914-7408
Yury S PolikanovCenter for Biomolecular Sciences, University of Illinois at Chicago, Chicago, Illinois 60607, USA.ORCID 0000-0002-5064-0327
University of Patras · GRUniversity of Illinois Chicago · US

Funding

Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
Pixel Array Detector for Macromolecular CrystallographyS10OD021527 · OD · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2016 to 2016
$2.0M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
Structural basis of Erm-mediated macrolide resistanceR21AI137584 · NIAID · UNIVERSITY OF ILLINOIS AT CHICAGO · PI MANKIN, ALEXANDER S, POLIKANOV, YURY · 2018 to 2019
$440k
NCRR NIH HHS S10 RR029205NIAID NIH HHS R21 AI137584NIGMS NIH HHS P41 GM103403NIH HHS S10 OD021527
6 · The paper itself

Abstract

The 70S ribosome is a major target for antibacterial drugs. Two of the classical antibiotics, chloramphenicol (CHL) and erythromycin (ERY), competitively bind to adjacent but separate sites on the bacterial ribosome: the catalytic peptidyl transferase center (PTC) and the nascent polypeptide exit tunnel (NPET), respectively. The previously reported competitive binding of CHL and ERY might be due either to a direct collision of the two drugs on the ribosome or due to a drug-induced allosteric effect. Because of the resolution limitations, the available structures of these antibiotics in complex with bacterial ribosomes do not allow us to discriminate between these two possible mechanisms. In this work, we have obtained two crystal structures of CHL and ERY in complex with the

Indexed as

Anti-Bacterial AgentsBinding, CompetitiveBinding SitesChloramphenicolCrystallography, X-RayErythromycinEscherichia coliModels, MolecularPeptidyl TransferasesProtein BindingProtein BiosynthesisProtein ConformationRibosome SubunitsThermus thermophilusAnti-Bacterial AgentsChloramphenicolErythromycinPeptidyl Transferases70S ribosomeantibioticchloramphenicolcompetitionerythromycininhibition of translationnascent peptide exit tunnelpeptidyl transferase centerX-ray structure

Identifiers

PMID30733327
PMCPMC6467010
OpenAlexW2913672362

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.