Evidence map›Paper›PMID 30732572›Full record

ArticleBMC infectious diseases2019

Underestimated pyrazinamide resistance may compromise outcomes of pyrazinamide containing regimens for treatment of drug susceptible and multi-drug-resistant tuberculosis in Tanzania.

Saumu Pazia Juma, Athanasia Maro, Suporn Pholwat, Stellah G Mpagama, Jean Gratz, Alphonse Liyoyo, Eric R Houpt, Gibson S Kibiki, Blandina T Mmbaga, Scott K Heysell

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

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  6. Whole genome sequencing of drug resistanceLife science alliance · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Saumu Pazia JumaKilimanjaro Clinical Research Institute, Moshi, Tanzania. s.pazia@kcri.ac.tz.
Athanasia MaroKilimanjaro Clinical Research Institute, Moshi, Tanzania.
Suporn PholwatDivision of Infectious Diseases and International Health, University of Virginia, Charlottesville, VA, USA.
Stellah G MpagamaKilimanjaro Christian Medical Centre and Kilimanjaro Christian Medical University College, Kilimanjaro, Tanzania.
Jean GratzKilimanjaro Clinical Research Institute, Moshi, Tanzania.
Alphonse LiyoyoKilimanjaro Clinical Research Institute, Moshi, Tanzania.
Eric R HouptDivision of Infectious Diseases and International Health, University of Virginia, Charlottesville, VA, USA.
Gibson S KibikiEast African Health Research Commission, Arusha, Tanzania.
Blandina T MmbagaKilimanjaro Clinical Research Institute, Moshi, Tanzania.
Scott K HeysellKibong'oto Infectious Diseases Hospital, Kilimanjaro, Tanzania.
Kilimanjaro Christian Medical Centre · TZUniversity of Virginia · USEast, Central and Southern Africa Health Community · TZ

Funding

Tuberculosis Second Line Drug Susceptibility ChipR01AI093358 · NIAID · UNIVERSITY OF VIRGINIA · PI HOUPT, ERIC R · 2011 to 2015
$4.0M
Diagnostics and Pharmacotherapy for Severe Forms of TBU01AI115594 · NIAID · UNIVERSITY OF VIRGINIA · PI HEYSELL, SCOTT K, HOUPT, ERIC R · 2015 to 2019
$3.0M
Global Infectious Disease Research Training Program AwardD43TW008270 · FIC · UNIVERSITY OF VIRGINIA · PI HOUPT, ERIC R · 2010 to 2014
$735k
Clinical Impact of Anti-TB Drug Levels and M. Tuberculosis SusceptibilityK23AI099019 · NIAID · UNIVERSITY OF VIRGINIA · PI HEYSELL, SCOTT K · 2012 to 2016
$649k
FIC NIH HHS D43 TW008270NIAID NIH HHS K23 AI099019NIAID NIH HHS R01 AI093358NIAID NIH HHS U01 AI115594
6 · The paper itself

Abstract

backgroundTuberculosis (TB) is the leading cause of death from an infectious disease and the roll-out of rapid molecular diagnostics for rifampin resistance has resulted in a steady rise in the number of patients with multidrug-resistant (MDR)-TB referred for treatment. Pyrazinamide is used in susceptible TB treatment for 6 months when used in combination with rifampin, isoniazid and ethambutol and is an important companion drug in novel MDR-TB trials. This study was undertaken to determine the prevalence of pyrazinamide resistance by either phenotypic or pncA testing among patients admitted to a referral hospital in Tanzania for drug-susceptible and MDR-TB treatment.

methodsSurveillance sputa were sent among subjects beginning TB therapy at the national MDR-TB referral hospital during a 6 month period in 2013-2014. Mycobacterial cultures of pretreatment sputa were performed at the Kilimanjaro Clinical Research Institute (KCRI) in the BACTEC mycobacterial growth indicator tubes (MGIT) 960 system. Speciation of M. tuberculosis complex was confirmed by MTBc assay. Isolates were sub-cultured on to Lowenstein-Jensen (LJ) slants. Phenotypic resistance to pyrazinamide was performed in the MGIT system while a real-time PCR with High Resolution Melt (HRM) technique was used to determine mutation in the pncA gene from the same pure subculture. Sputa were then collected monthly to determine the time to culture negativity. Final treatment outcome was determined.

resultsNinety-one M. tuberculosis isolates from individual patients were available for analysis of which 30 (32.9%) had MDR-TB, the mean (±SD) age was 33 ± 10 years, and the majority 23 (76.7%) were males. Of the 30 MDR-TB patients, 15(50%) had isolates with pyrazinamide resistance by conventional MGIT testing. This proportion expectedly exceeded the number with pyrazinamide resistance in the 61 patients without MDR-TB, 13 (21.3%) (p = 0.008). Six (20%) of MDR-TB patients had a poor outcome including treatment failure. Among patients with treatment failure, 5 (83%) had pyrazinamide resistance compared to only 10 (41.6%) with treatment success (p = 0.08). Two patients died, and both had isolates with pyrazinamide resistance. No other pretreatment characteristic was associated with treatment outcome.

conclusionPyrazinamide susceptibility appears to be important in clinical outcomes for MDR-TB patients, and susceptibility testing appears to be a critical adjunct to TB care. The high proportion of PZA resistance in non-MDR TB cases calls for further local investigation.

Indexed as

AdultAmidohydrolasesAntitubercular AgentsFemaleHumansMaleMicrobial Sensitivity TestsMiddle AgedMutationMycobacterium tuberculosisPrevalencePyrazinamideTanzaniaTuberculosisTuberculosis, Multidrug-ResistantYoung AdultAmidohydrolasesAntitubercular AgentsPncA protein, Mycobacterium tuberculosisPyrazinamide

Identifiers

PMID30732572
PMCPMC6367741
OpenAlexW2918950353

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.