Evidence map›Paper›PMID 30732150›Full record

Observational studyMedicine2019

Drug resistance mutations and viral load in human immunodeficiency virus type 2 and dual HIV-1/HIV-2 infected patients in Ghana.

Christopher Z Abana, Kwamena W C Sagoe, Evelyn Y Bonney, Edward K Maina, Ishmael D Aziati, Esinam Agbosu, Gifty Mawuli, Linda M Styer, Koichi Ishikawa, James A M Brandful and 1 more

Open access · goldAbstract readObservational Study
In one paragraph

Observational study in Medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. HIV-2 Drug Resistance Genotyping from Dried Blood Spots.Journal of clinical microbiology · 2020
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 4 countries.

Christopher Z AbanaVirology Department, Noguchi Memorial Institute for Medical Research, College of Health Sciences.
Kwamena W C SagoeDepartment of Medical Microbiology, School of Biomedical and Allied Health Sciences, University of Ghana, Ghana.
Evelyn Y BonneyVirology Department, Noguchi Memorial Institute for Medical Research, College of Health Sciences.
Edward K MainaVirology Department, Noguchi Memorial Institute for Medical Research, College of Health Sciences.
Ishmael D AziatiVirology Department, Noguchi Memorial Institute for Medical Research, College of Health Sciences.
Esinam AgbosuVirology Department, Noguchi Memorial Institute for Medical Research, College of Health Sciences.
Gifty MawuliVirology Department, Noguchi Memorial Institute for Medical Research, College of Health Sciences.
Linda M StyerWadsworth Center, New York State Department of Health, Albany, NY.
Koichi IshikawaAIDS Research Center, National Institute of Infectious Diseases, NIID, Tokyo, Japan.
James A M BrandfulVirology Department, Noguchi Memorial Institute for Medical Research, College of Health Sciences.
William K AmpofoVirology Department, Noguchi Memorial Institute for Medical Research, College of Health Sciences.
Noguchi Memorial Institute for Medical Research · GHKenya Medical Research Institute · KETokyo Medical and Dental University · JPUniversity of Ghana · GHWadsworth Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antiretroviral therapy (ART) and drug resistance studies worldwide have focused almost exclusively on human immunodeficiency virus type 1 (HIV-1). As a result, there is limited information on ART and drug resistance in HIV-2 patients. In Ghana, the HIV epidemic is characterized by the domination of HIV-1, with cocirculating HIV-2. We, therefore, sought to determine viral load and drug resistance mutations in HIV-2 patients to inform the clinical management of such individuals in Ghana.We used purposive sampling to collect blood from 16 consented patients, confirmed as HIV-2 or HIV-1/2 dual infections by serology. A 2-step real-time RT-PCR assay was used to determine plasma HIV-2 RNA viral loads. For drug resistance testing, nucleic acids were extracted from plasma and peripheral blood mononuclear cells. The reverse transcriptase and protease genes of HIV-2 were amplified, sequenced and analyzed for drug resistance mutations and HIV-2 group.HIV-2 viral load was detected in 9 of 16 patients. Six of these had quantifiable viral loads (range: 2.62-5.45 log IU/mL) while 3 had viral loads below the limit of quantification. Sequences were generated from 7 out of 16 samples. Five of these were classified as HIV-2 group B and 2 as HIV-2 group A. HIV-2 drug resistance mutations (M184V, K65R, Y115F) were identified in 1 patient.This study is the first to report HIV-2 viral load and drug resistance mutations in HIV-2 strains from Ghana. The results indicate the need for continuous monitoring of drug resistance among HIV-2- infected patients to improve their clinical management.

Indexed as

Viral LoadAdultAgedAnti-HIV AgentsCross-Sectional StudiesDrug Resistance, ViralFemaleGhanaHIV-1HIV-2HIV InfectionsHumansMaleMiddle AgedMutationYoung AdultAnti-HIV Agents

Identifiers

PMID30732150
PMCPMC6380870
OpenAlexW2913120105

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.