Evidence map›Paper›PMID 30731132›Full record

ArticleBiochimica et biophysica acta. Molecular and cell biology of lipids2019

Insights into the histology of planarian flatworm Phagocata gracilis based on location specific, intact lipid information provided by GCIB-ToF-SIMS imaging.

Tina B Angerer, Neil Chakravarty, Michael J Taylor, Carrie D Nicora, Daniel J Graham, Christopher R Anderton, Eric H Chudler, Lara J Gamble

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta. Molecular and cell biology of lipids, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Tina B AngererNESACBIO, University of Washington, Seattle, WA, United States of America; Department of Bioengineering, University of Washington, Seattle, WA, United States of America.
Neil ChakravartyDepartment of Bioengineering, University of Washington, Seattle, WA, United States of America.
Michael J TaylorNESACBIO, University of Washington, Seattle, WA, United States of America; Department of Bioengineering, University of Washington, Seattle, WA, United States of America.
Carrie D NicoraEarth and Biological Science Directorate, Pacific Northwest National Laboratory, Richland, WA, United States of America.
Daniel J GrahamNESACBIO, University of Washington, Seattle, WA, United States of America; Department of Bioengineering, University of Washington, Seattle, WA, United States of America.
Christopher R AndertonEarth and Biological Science Directorate, Pacific Northwest National Laboratory, Richland, WA, United States of America.
Eric H ChudlerDepartment of Bioengineering, University of Washington, Seattle, WA, United States of America; Department of Anesthesiology and Pain Medicine, University of Washington, Seattle, WA, United States of America.
Lara J GambleNESACBIO, University of Washington, Seattle, WA, United States of America; Department of Bioengineering, University of Washington, Seattle, WA, United States of America. Electronic address: lgamble@uw.edu.
University of Washington · USPacific Northwest National Laboratory · US

Funding

Surface Analysis Facility for Biomedical ProblemsP41EB002027 · NIBIB · UNIVERSITY OF WASHINGTON · PI CASTNER, DAVID G · 2003 to 2019
$17.6M
MS Chemical Imager InstrumentS10OD012309 · OD · UNIVERSITY OF WASHINGTON · PI CASTNER, DAVID G · 2014 to 2014
$1.7M
NIBIB NIH HHS P41 EB002027NIH HHS S10 OD012309
6 · The paper itself

Abstract

Planarian flatworms are known as the masters of regeneration, re-growing an entire organism from as little as 1/279th part of their body. While the proteomics of these processes has been studied extensively, the planarian lipodome remains relatively unknown. In this study we investigate the lipid profile of planarian tissue sections with imaging Time-of-Flight - Secondary-Ion-Mass-Spectrometry (ToF-SIMS). ToF-SIMS is a label-free technique capable of gathering intact, location specific lipid information on a cellular scale. Lipid identities are confirmed using LC-MS/MS. Our data shows that different organ structures within planarians have unique lipid profiles. The 22-carbon atom poly unsaturated fatty acids (PUFAs) which occur in unusually high amounts in planarians are found to be mainly located in the testes. Additionally, we observe that planarians contain various odd numbered fatty acid species, that are usually found in bacteria, localized in the reproductive and ectodermal structures of the planarian. An abundance of poorly understood ether fatty acids and ether lipids were found in unique areas in planarians as well as a new, yet unidentified class of potential lipids in planarian intestines. Identifying the location of these lipids in the planarian body provides insights into their bodily functions and, in combination with knowledge about their diet and their genome, enables drawing conclusions about planarian fatty acid processing.

Indexed as

AnimalsFatty AcidsLipidsMicroscopyOptical ImagingPlanariansSpectrometry, Mass, Secondary IonFatty AcidsLipids

Identifiers

PMID30731132
PMCPMC6506226
OpenAlexW2914009687

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.