Evidence map›Paper›PMID 30730705›Full record

ArticleBiochemistry2019

Transition State Analysis of the Reaction Catalyzed by the Phosphotriesterase from Sphingobium sp. TCM1.

Andrew N Bigley, Dao Feng Xiang, Tamari Narindoshvili, Charlie W Burgert, Alvan C Hengge, Frank M Raushel

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 17 citations in OpenAlex.

  1. PHP-Family Diesterase fromBiochemistry · 2024
    Article
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  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Andrew N BigleyDepartment of Chemistry , Texas A&M University , College Station , Texas 77843 , United States.
Dao Feng XiangDepartment of Chemistry , Texas A&M University , College Station , Texas 77843 , United States.
Tamari NarindoshviliDepartment of Chemistry , Texas A&M University , College Station , Texas 77843 , United States.
Charlie W BurgertDepartment of Chemistry and Biochemistry , Utah State University , Logan , Utah 84322 , United States.
Alvan C HenggeDepartment of Chemistry and Biochemistry , Utah State University , Logan , Utah 84322 , United States.ORCID 0000-0002-5696-2087
Frank M RaushelDepartment of Chemistry , Texas A&M University , College Station , Texas 77843 , United States.ORCID 0000-0002-5918-3089
Texas A&M University · USUtah State University · US

Funding

Enzymatic Hydrolysis of Organophosphate EstersR01GM116894 · NIGMS · TEXAS A&M UNIVERSITY · PI RAUSHEL, FRANK M. · 2017 to 2020
$1.1M
NIGMS NIH HHS R01 GM116894
6 · The paper itself

Abstract

Organophosphorus flame retardants are stable toxic compounds used in nearly all durable plastic products and are considered major emerging pollutants. The phosphotriesterase from Sphingobium sp. TCM1 ( Sb-PTE) is one of the few enzymes known to be able to hydrolyze organophosphorus flame retardants such as triphenyl phosphate and tris(2-chloroethyl) phosphate. The effectiveness of Sb-PTE for the hydrolysis of these organophosphates appears to arise from its ability to hydrolyze unactivated alkyl and phenolic esters from the central phosphorus core. How Sb-PTE is able to catalyze the hydrolysis of the unactivated substituents is not known. To interrogate the catalytic hydrolysis mechanism of Sb-PTE, the pH dependence of the reaction and the effects of changing the solvent viscosity were determined. These experiments were complemented by measurement of the primary and secondary 18-oxygen isotope effects on substrate hydrolysis and a determination of the effects of changing the p K

Indexed as

Bacterial ProteinsCatalysisCatalytic DomainDeuteriumHydrogen-Ion ConcentrationHydrolysisKineticsMagnetic Resonance SpectroscopyOrganophosphatesParaoxonPhosphoric Triester HydrolasesSolventsSphingomonadaceaeViscosityBacterial ProteinsDeuteriumOrganophosphatesParaoxonPhosphoric Triester HydrolasesSolvents

Identifiers

PMID30730705
PMCPMC6686203
OpenAlexW2914231073

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.