Evidence map›Paper›PMID 30729724›Full record

ArticleMolecular genetics & genomic medicine2019

Dysregulations of sonic hedgehog signaling in MED12-related X-linked intellectual disability disorders.

Siddharth Srivastava, Tejasvi Niranjan, Melanie M May, Patrick Tarpey, William Allen, Anna Hackett, Pierre-Simon Jouk, Lucy Raymond, Slyvain Briault, Cindy Skinner and 6 more

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

  1. Global Co-regulatory Cross Talk Between mMolecular neurobiology · 2025
    Article
  2. Novel insights into the phenotypic spectrum and pathogenesis of Hardikar syndrome.Genetics in medicine : official journal of the American College of Medical Genetics · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Genes · 2021
    Review
  7. De novo variants in MED12 cause X-linked syndromic neurodevelopmental disorders in 18 females.Genetics in medicine : official journal of the American College of Medical Genetics · 2021
    Article
  8. De novo loss-of-function variants in X-linked MED12 are associated with Hardikar syndrome in females.Genetics in medicine : official journal of the American College of Medical Genetics · 2021
    Article
  9. Somatic andFrontiers in cell and developmental biology · 2021
    Article
  10. Mutations in Mediator Complex GenesMolecular syndromology · 2020
    Article
  11. Frontiers in genetics · 2020
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 10 institutions in 4 countries.

Siddharth SrivastavaInstitute of Genetic Medicine and Department of Pediatrics, Johns Hopkins University, Baltimore, Maryland.
Tejasvi NiranjanInstitute of Genetic Medicine and Department of Pediatrics, Johns Hopkins University, Baltimore, Maryland.
Melanie M MayGreenwood Genetic Center, Greenwood, South Carolina.
Patrick TarpeyWelcome Trust Sanger Institute, Cambridge, UK.
William AllenFullerton Genetics, Asheville, North Carolina.
Anna HackettGenetics of Learning Disability Service, Hunter Genetics, Waratah, NSW, Australia.
Pierre-Simon JoukService de Génétique Clinique, Hôpital Couple-Enfant, Grenoble, France.
Lucy RaymondCambridge Institute of Medical Research, Cambridge, UK.
Slyvain BriaultCentre Hospitalier Régional d'Orléans, Orléans, France.
Cindy SkinnerGreenwood Genetic Center, Greenwood, South Carolina.
Annick ToutainService de Génétique Clinique, Hôpital Bretonneau, Tours, France.
Jozef GeczAdelaide Medical School and Robinson Research Institute, The University of Adelaide, Adelaide, Australia.ORCID 0000-0002-7884-6861
William HeathJ.I. Riddle Developmental Center, Morganton, North Carolina.
Roger E StevensonGreenwood Genetic Center, Greenwood, South Carolina.
Charles E SchwartzGreenwood Genetic Center, Greenwood, South Carolina.ORCID 0000-0002-7770-1943
Tao WangInstitute of Genetic Medicine and Department of Pediatrics, Johns Hopkins University, Baltimore, Maryland.ORCID 0000-0002-9697-4082
Greenwood Genetic Center · USJohns Hopkins University · USCentre Hospitalier Universitaire de Tours · FRCentre hospitalier universitaire d'Orléans · FRFullerton College · USHôpital Couple Enfant · FRHunter Genetics · AUJ. Iverson Riddle Developmental Center · USThe University of Adelaide · AUWellcome Sanger Institute · GB

Funding

X-LINKED MENTAL RETARDATION: LINKAGE &CLINICAL STUDIESR01HD026202 · NICHD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI SCHWARTZ, CHARLES E · 1990 to 2006
$7.9M
Identification of Novel X-linked Intellectual Disability GenesR01NS073854 · NINDS · GREENWOOD GENETIC CENTER · PI SCHWARTZ, CHARLES E, WANG, TAO · 2011 to 2013
$1.4M
NICHD NIH HHS R01 HD026202NINDS NIH HHS R01 NS073854
6 · The paper itself

Abstract

backgroundMutations in mediator of RNA polymerase II transcription subunit 12 homolog (MED12, OMIM 300188) cause X-linked intellectual disability (XLID) disorders including FG, Lujan, and Ohdo syndromes. The Gli3-dependent Sonic Hedgehog (SHH) signaling pathway has been implicated in the original FG syndrome and Lujan syndrome. How are SHH-signaling defects related to the complex clinical phenotype of MED12-associated XLID syndromes are not fully understood.

methodsQuantitative RT-PCR was used to study expression levels of three SHH-signaling genes in lymophoblast cell lines carrying four MED12 mutations from four unrelated XLID families. Genotype and phenotype correlation studies were performed on these mutations.

resultsThree newly identified and one novel MED12 mutations in six affected males from four unrelated XLID families were studied. Three mutations (c.2692A>G; p.N898D, c.3640C>T; p.R1214C, and c.3884G>A; p.R1295H) are located in the LS domain and one (c.617G>A; p.R206Q) is in the L domain of MED12. These mutations involve highly conserved amino acid residues and segregate with ID and related congenital malformations in respective probands families. Patients with the LS-domain mutations share many features of FG syndrome and some features of Lujan syndrome. The patient with the L-domain mutation presented with ID and predominant neuropsychiatric features but little dysmorphic features of either FG or Lujan syndrome. Transcript levels of three Gli3-dependent SHH-signaling genes, CREB5, BMP4, and NEUROG2, were determined by quantitative RT-PCR and found to be significantly elevated in lymphoblasts from patients with three mutations in the MED12-LS domain.

conclusionsThese results support a critical role of MED12 in regulating Gli3-dependent SHH signaling and in developing ID and related congenital malformations in XLID syndromes. Differences in the expression profile of SHH-signaling genes potentially contribute to variability in clinical phenotypes in patients with MED12-related XLID disorders.

Indexed as

Mutation, MissenseAdultBasic Helix-Loop-Helix ProteinsBone Morphogenetic Protein 4Cells, CulturedCraniofacial AbnormalitiesCyclic AMP Response Element-Binding Protein AHedgehog ProteinsHumansMaleMediator ComplexMiddle AgedNerve Tissue ProteinsPedigreeProtein DomainsSignal TransductionBasic Helix-Loop-Helix ProteinsBMP4 protein, humanBone Morphogenetic Protein 4CREB5 protein, humanCyclic AMP Response Element-Binding Protein AHedgehog ProteinsMED12 protein, humanMediator ComplexNerve Tissue ProteinsNEUROG2 protein, humanSHH protein, humanMED12MutationqRT-PCRSHH SignalingXLID

Identifiers

PMID30729724
PMCPMC6465656
OpenAlexW2913257924

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.