Evidence map›Paper›PMID 30729093›Full record

Article3 Biotech2019

Species-specific loop-mediated isothermal amplification (LAMP) assay for identification of tissue of cattle origin by targeting mitochondrial gene sequences.

Sarita Kumari, Rajiv Ranjan Kumar, Sanjod Kumar Mendiratta, Deepak Kumar, Preeti Rana, Dhananjay Kumar, Jyoti Jawla

Abstract read
In one paragraph

Article in 3 Biotech, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. The complete mitochondrial genome analysis ofMitochondrial DNA. Part B, Resources · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sarita KumariDepartment of Livestock Products Technology, PGIVER, RAJUVAS, Jaipur, India.
Rajiv Ranjan Kumar2Division of Livestock Products Technology, Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122 India.ORCID 0000-0001-5495-3825
Sanjod Kumar Mendiratta2Division of Livestock Products Technology, Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122 India.
Deepak Kumar3Division of Veterinary Biotechnology, IVRI, Izatnagar, India.
Preeti RanaDepartment of Livestock Products Technology, CVASc, DUVASU, Mathura, India.
Dhananjay Kumar2Division of Livestock Products Technology, Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122 India.
Jyoti Jawla2Division of Livestock Products Technology, Indian Veterinary Research Institute, Izatnagar, Bareilly, 243122 India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present study was carried out with the objective of development of species-specific loop-mediated isothermal amplification (LAMP) assay for identification of tissue of cattle origin. The cattle-specific LAMP primer set was designed by targeting mitochondrial D-loop gene. The conditions for LAMP reaction for amplification of template DNA from cattle using designed cattle-specific primer set were optimized for the components of mixture and temperature of reaction. Amplified products were analysed using SYBR Green I dye and by agarose gel electrophoresis. The developed species-specific LAMP assay was evaluated for its specificity, sensitivity and validated in laboratory on samples from known, coded, binary meat admixture with other than cattle at relative percentage of 20%, 10%, 5% and 1%, Phire tissue direct PCR master mix treated tissues of cattle and on species-specific polymerase chain reaction assay positive samples. The developed LAMP assay using self-designed primer set was highly specific, amplifying the DNA template exclusively from cattle tissue under the optimized LAMP reaction conditions. The sensitivity assay using serially diluted DNA templates revealed lowest level of detection as 0.01 ng of absolute DNA from target species. Laboratory validation substantiated the accuracy of assay in known/unknown (coded) samples and up to the 1% level of admixture in binary meat sample. DNA present in supernatant of Phire Animal tissue kit treated samples were also amplified successfully eliminating the extra step of extraction of genomic DNA. The developed assays exhibited comparable results with previously established species-specific PCR assay taken as gold standards. Thus, it was concluded that developed species-specific loop-mediated isothermal amplification assay was effective in identification of tissue of cattle origin.

Indexed as

CattleLoop-mediated isothermal amplification (LAMP)Sensitivity and laboratory validationSpecies-specific

Identifiers

PMID30729093
PMCPMC6363609

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.