ArticleHorticulture research2019
Integrated analysis of high-throughput sequencing data shows abscisic acid-responsive genes and miRNAs in strawberry receptacle fruit ripening.
Article in Horticulture research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.
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Who cites it
30 citing papers in PubMed, 83 citations in OpenAlex.
- Mechanical Injury Enhances Ethylene-Associated Transcriptional and Metabolic Responses of Strawberry Fruit During Shelf-Life Period.Foods (Basel, Switzerland) · 2026Article
- Molecular orchestration of malate and citrate metabolism: regulatory networks governing organic acid dynamics and fruit quality attributes.Horticulture research · 2026Article
- Genome-Wide Identification of thePlants (Basel, Switzerland) · 2026Article
- MicroRNA-Mediated Hormonal Control of Fruit Morphology.Plants (Basel, Switzerland) · 2026Review
- Comprehensive Analysis of thePlants (Basel, Switzerland) · 2025Article
- Recent advances in biosynthesis and regulation of strawberry anthocyanins.Horticulture research · 2025Article
- Unraveling the Hormonal and Molecular Mechanisms Shaping Fruit Morphology in Plants.Plants (Basel, Switzerland) · 2025Review
- Non-climacteric fruit development and ripening regulation: 'the phytohormones show'.Journal of experimental botany · 2023Review
- Colorful hues: insight into the mechanisms of anthocyanin pigmentation in fruit.Plant physiology · 2023Article
- Abscisic Acid Synthesis and Signaling during the Ripening of Raspberry (Plants (Basel, Switzerland) · 2023Article
- Participation of FaTRAB1 Transcription Factor in the Regulation ofFoods (Basel, Switzerland) · 2023Article
- Identification and Characterization of Long Non-Coding RNAs: Implicating Insights into Their Regulatory Role in Kiwifruit Ripening and Softening during Low-Temperature Storage.Plants (Basel, Switzerland) · 2023Article
- Abscisic acid biosynthesis, metabolism and signaling in ripening fruit.Frontiers in plant science · 2023Review
- Identification and characterization of miRNAs and PHAS loci related to the early development of the embryo and endosperm in Fragaria × ananassa.BMC genomics · 2022Article
- Genome-Wide Analysis of Ascorbic Acid Metabolism Related Genes inFrontiers in plant science · 2022Article
- Signal transduction in non-climacteric fruit ripening.Horticulture research · 2022Article
- Transcriptomic Complexity in Strawberry Fruit Development and Maturation Revealed by Nanopore Sequencing.Frontiers in plant science · 2022Article
- Transcriptome Profiling of Transposon-Derived Long Non-coding RNAs Response to Hormone in Strawberry Fruit Development.Frontiers in plant science · 2022Article
- Abscisic Acid: Role in Fruit Development and Ripening.Frontiers in plant science · 2022Review
- Effects of Light Intensity and Spectral Composition on the Transcriptome Profiles of Leaves in Shade Grown Tea Plants (Molecules (Basel, Switzerland) · 2021Article
Corrections and comments
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Authors and funding
9 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The perception and signal transduction of the plant hormone abscisic acid (ABA) are crucial for strawberry fruit ripening, but the underlying mechanism of how ABA regulates ripening-related genes has not been well understood. By employing high-throughput sequencing technology, we comprehensively analyzed transcriptomic and miRNA expression profiles simultaneously in ABA- and nordihydroguaiaretic acid (NDGA, an ABA biosynthesis blocker)-treated strawberry fruits with temporal resolution. The results revealed that ABA regulated many genes in different pathways, including hormone signal transduction and the biosynthesis of secondary metabolites. Transcription factor genes belonging to WRKY and heat shock factor (HSF) families might play key roles in regulating the expression of ABA inducible genes, whereas the KNOTTED1-like homeobox protein and Squamosa Promoter-Binding-like protein 18 might be responsible for ABA-downregulated genes. Additionally, 20 known and six novel differentially expressed miRNAs might be important regulators that assist ABA in regulating target genes that are involved in versatile physiological processes, such as hormone balance regulation, pigments formation and cell wall degradation. Furthermore, degradome analysis showed that one novel miRNA, Fa_novel6, could degrade its target gene
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.