Evidence map›Paper›PMID 30728462›Full record

ArticleCell death and differentiation2019

MINA-1 and WAGO-4 are part of regulatory network coordinating germ cell death and RNAi in C. elegans.

Ataman Sendoel, Deni Subasic, Luca Ducoli, Martin Keller, Erich Michel, Ines Kohler, Kapil Dev Singh, Xue Zheng, Anneke Brümmer, Jochen Imig and 12 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell death and differentiation, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 5 institutions in 4 countries.

Ataman SendoelInstitute of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, 8057, Zurich, Switzerland.
Deni SubasicInstitute of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, 8057, Zurich, Switzerland.
Luca DucoliInstitute of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, 8057, Zurich, Switzerland.
Martin KellerInstitute of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, 8057, Zurich, Switzerland.
Erich MichelInstitute of Molecular Biology and Biophysics, ETH Zurich, Auguste-Piccard-Hof 1, 8093, Zurich, Switzerland.ORCID http://orcid.org/0000-0002-5252-5429
Ines KohlerInstitute of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, 8057, Zurich, Switzerland.
Kapil Dev SinghInstitute of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, 8057, Zurich, Switzerland.
Xue ZhengInstitute of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, 8057, Zurich, Switzerland.
Anneke BrümmerBiozentrum, University of Basel, Klingelbergstrasse 50/70, 4056, Basel, Switzerland.
Jochen ImigInstitute of Pharmaceutical Sciences, ETH Zurich, Wolfgang-Pauli-Strasse 10, 8093, Zürich, Switzerland.
Shivendra KishoreBiozentrum, University of Basel, Klingelbergstrasse 50/70, 4056, Basel, Switzerland.
Yibo WuInstitute of Molecular Systems Biology, ETH Zurich, Auguste-Piccard-Hof 1, 8093, Zurich, Switzerland.
Alexander KanitzBiozentrum, University of Basel, Klingelbergstrasse 50/70, 4056, Basel, Switzerland.
Andres KaechCenter for Microscopy and Image Analysis, University of Zurich, Winterthurerstrasse 190, 8057, Zurich, Switzerland.
Nitish MittalBiozentrum, University of Basel, Klingelbergstrasse 50/70, 4056, Basel, Switzerland.
Ana M Matia-GonzálezDepartment of Microbial and Cellular Sciences, Faculty of Health and Medical Sciences, University of Surrey, Stag Hill Campus 19 AX 01, GU2 7XH, Guildford, UK.ORCID http://orcid.org/0000-0002-8127-4219
André P GerberDepartment of Microbial and Cellular Sciences, Faculty of Health and Medical Sciences, University of Surrey, Stag Hill Campus 19 AX 01, GU2 7XH, Guildford, UK.ORCID http://orcid.org/0000-0002-2398-6592
Mihaela ZavolanBiozentrum, University of Basel, Klingelbergstrasse 50/70, 4056, Basel, Switzerland.
Ruedi AebersoldInstitute of Molecular Systems Biology, ETH Zurich, Auguste-Piccard-Hof 1, 8093, Zurich, Switzerland.
Jonathan HallInstitute of Pharmaceutical Sciences, ETH Zurich, Wolfgang-Pauli-Strasse 10, 8093, Zürich, Switzerland.
Frédéric H-T AllainInstitute of Molecular Biology and Biophysics, ETH Zurich, Auguste-Piccard-Hof 1, 8093, Zurich, Switzerland.
Michael O HengartnerInstitute of Molecular Life Sciences, University of Zurich, Winterthurerstrasse 190, 8057, Zurich, Switzerland. michael.hengartner@imls.uzh.ch.
University of Zurich · CHUniversity of Basel · CHETH Zurich · CHUniversity of Surrey · GBZHAW Zurich University of Applied Sciences · CH

Funding

Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (Swiss National Science Foundation) 141942Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (Swiss National Science Foundation) 143932
6 · The paper itself

Abstract

Post-transcriptional control of mRNAs by RNA-binding proteins (RBPs) has a prominent role in the regulation of gene expression. RBPs interact with mRNAs to control their biogenesis, splicing, transport, localization, translation, and stability. Defects in such regulation can lead to a wide range of human diseases from neurological disorders to cancer. Many RBPs are conserved between Caenorhabditis elegans and humans, and several are known to regulate apoptosis in the adult C. elegans germ line. How these RBPs control apoptosis is, however, largely unknown. Here, we identify mina-1(C41G7.3) in a RNA interference-based screen as a novel regulator of apoptosis, which is exclusively expressed in the adult germ line. The absence of MINA-1 causes a dramatic increase in germ cell apoptosis, a reduction in brood size, and an impaired P granules organization and structure. In vivo crosslinking immunoprecipitation experiments revealed that MINA-1 binds a set of mRNAs coding for RBPs associated with germ cell development. Additionally, a system-wide analysis of a mina-1 deletion mutant compared with wild type, including quantitative proteome and transcriptome data, hints to a post-transcriptional regulatory RBP network driven by MINA-1 during germ cell development in C. elegans. In particular, we found that the germline-specific Argonaute WAGO-4 protein levels are increased in mina-1 mutant background. Phenotypic analysis of double mutant mina-1;wago-4 revealed that contemporary loss of MINA-1 and WAGO-4 strongly rescues the phenotypes observed in mina-1 mutant background. To strengthen this functional interaction, we found that upregulation of WAGO-4 in mina-1 mutant animals causes hypersensitivity to exogenous RNAi. Our comprehensive experimental approach allowed us to describe a phenocritical interaction between two RBPs controlling germ cell apoptosis and exogenous RNAi. These findings broaden our understanding of how RBPs can orchestrate different cellular events such as differentiation and death in C. elegans.

Indexed as

RNA InterferenceAnimalsArgonaute ProteinsCaenorhabditis elegansCaenorhabditis elegans ProteinsGerm CellsArgonaute ProteinsCaenorhabditis elegans ProteinsWAGO-4 protein, C elegans

Identifiers

PMID30728462
PMCPMC6748153
OpenAlexW2903023652

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.