Evidence map›Paper›PMID 30728347›Full record

ArticleTranslational psychiatry2019

The lncRNA BDNF-AS is an epigenetic regulator in the human amygdala in early onset alcohol use disorders.

John Peyton Bohnsack, Tara Teppen, Evan J Kyzar, Svetlana Dzitoyeva, Subhash C Pandey

Open access · goldAbstract read
In one paragraph

Article in Translational psychiatry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed, 1 pooled it
4.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 1 synthesis or guideline pooled it, 105 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Global deletion ofbioRxiv : the preprint server for biology · 2026
    Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Mapping rat lncRNA Bdnf-as.Molecular biology reports · 2025
    Article
  13. Article
  14. The Role of Long Non-Coding RNA in Anxiety Disorders: A Literature Review.International journal of molecular sciences · 2025
    Review
  15. Review
  16. Article
  17. Functional Consequences Paternal Preconceptual Alcohol Consumption.Current topics in behavioral neurosciences · 2025
    Review
  18. Article
  19. Human genetics and epigenetics of alcohol use disorder.The Journal of clinical investigation · 2024
    Review
  20. Review

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

John Peyton BohnsackCenter for Alcohol Research in Epigenetics, Department of Psychiatry, University of Illinois at Chicago, Chicago, IL, 60612, USA.ORCID http://orcid.org/0000-0002-8713-4436
Tara TeppenCenter for Alcohol Research in Epigenetics, Department of Psychiatry, University of Illinois at Chicago, Chicago, IL, 60612, USA.
Evan J KyzarCenter for Alcohol Research in Epigenetics, Department of Psychiatry, University of Illinois at Chicago, Chicago, IL, 60612, USA.ORCID http://orcid.org/0000-0002-7688-0281
Svetlana DzitoyevaCenter for Alcohol Research in Epigenetics, Department of Psychiatry, University of Illinois at Chicago, Chicago, IL, 60612, USA.
Subhash C PandeyCenter for Alcohol Research in Epigenetics, Department of Psychiatry, University of Illinois at Chicago, Chicago, IL, 60612, USA. scpandey@uic.edu.ORCID http://orcid.org/0000-0001-7139-8464
University of Illinois Chicago · US

Funding

Pilot Project Program P50AA022538 · NIAAA · UNIVERSITY OF ILLINOIS AT CHICAGO · PI MARK S BRODIE · 2015 to 2026
$21.3M
Brain Tissue Resource Centre for Alcohol ResearchR28AA012725 · NIAAA · UNIVERSITY OF SYDNEY · PI Greg Trevor Sutherland · 2012 to 2026
$7.0M
Role of AIE in Epigenetic and Behavioral Changes at AdulthoodU01AA019971 · NIAAA · UNIVERSITY OF ILLINOIS AT CHICAGO · PI PANDEY, SUBHASH C. · 2010 to 2024
$5.6M
2/2 NADIA U24 Epigenetic/Molecular CoreU24AA024605 · NIAAA · UNIVERSITY OF ILLINOIS AT CHICAGO · PI PANDEY, SUBHASH C. · 2015 to 2024
$3.6M
Brain histone methylation mechanisms in adulthood after adolescent alcohol exposureF30AA024948 · NIAAA · UNIVERSITY OF ILLINOIS AT CHICAGO · PI KYZAR, EVAN · 2016 to 2019
$197k
ROLE OF EZH2 MEDIATED EPIGENETIC CHANGES AND INCREASED DRINKING IN ADULTHOOD BY ADOLESCENT ALCOHOL EXPOSUREF32AA027410 · NIAAA · UNIVERSITY OF ILLINOIS AT CHICAGO · PI BOHNSACK, JOHN P · 2018 to 2020
$129k
NIAAA NIH HHS F30 AA024948NIAAA NIH HHS F32 AA027410NIAAA NIH HHS P50 AA022538NIAAA NIH HHS R28 AA012725NIAAA NIH HHS U01 AA019971NIAAA NIH HHS U24 AA024605
6 · The paper itself

Abstract

Adolescent alcohol drinking is known to contribute to the development and severity of alcohol use disorders (AUDs) later in adulthood. Recent studies have shown that long non-coding RNAs (lncRNAs) are critical for brain development and synaptic plasticity. One such lncRNA is natural occurring brain-derived neurotrophic factor antisense (BDNF-AS) that has been shown to regulate BDNF expression. The role of BDNF-AS lncRNA in the molecular mechanisms of AUD is unknown. Here, we evaluated the expression and functional role of BDNF-AS in postmortem amygdala of either early onset or late onset alcoholics (individuals who began drinking before or after 21 years of age, respectively) and age-matched control subjects. BDNF-AS expression is increased in early onset but not in late onset AUD amygdala and appears to be regulated epitranscriptomically via decreased N6-methyladenosine on BDNF-AS. Upregulation of BDNF-AS is associated with a significant decrease in BDNF expression and increased recruitment of EZH2, which deposits repressive H3K27 trimethylation (H3K27me3) at regulatory regions in the BDNF gene in the early onset AUD group. Drinking during adolescence also contributed to significant decreases in activity-regulated cytoskeleton-associated protein (ARC) expression which also appeared to be mediated by increased EZH2 deposition of repressive H3K27me3 at the ARC synaptic activity response element. These results suggest an important role for BDNF-AS in the regulation of synaptic plasticity via epigenetic reprogramming in the amygdala of AUD subjects who began drinking during adolescence.

Indexed as

AlcoholismAmygdalaBrain-Derived Neurotrophic FactorCase-Control StudiesCytoskeletal ProteinsEnhancer of Zeste Homolog 2 ProteinFemaleHumansMaleMiddle AgedNeuronal PlasticityRNA, Long NoncodingBDNF protein, humanBrain-Derived Neurotrophic FactorCytoskeletal ProteinsEnhancer of Zeste Homolog 2 ProteinEZH2 protein, humanRNA, Long Noncoding

Identifiers

PMID30728347
PMCPMC6365546
OpenAlexW2911508257

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.