Evidence map›Paper›PMID 30728258›Full record

ArticleJournal of virology2019

Medusavirus, a Novel Large DNA Virus Discovered from Hot Spring Water.

Genki Yoshikawa, Romain Blanc-Mathieu, Chihong Song, Yoko Kayama, Tomohiro Mochizuki, Kazuyoshi Murata, Hiroyuki Ogata, Masaharu Takemura

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 108 papers.

0numbers the graph read from it
0cells of the map it votes in
108citing papers in PubMed
15.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

108 citing papers in PubMed, 168 citations in OpenAlex.

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48 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Genki YoshikawaInstitute for Chemical Research, Kyoto University, Gokasho, Uji, Kyoto, Japan.
Romain Blanc-MathieuInstitute for Chemical Research, Kyoto University, Gokasho, Uji, Kyoto, Japan.
Chihong SongNational Institute for Physiological Sciences, Okazaki, Aichi, Japan.
Yoko KayamaNational Institute for Physiological Sciences, Okazaki, Aichi, Japan.
Tomohiro MochizukiEarth-Life Science Institute, Tokyo Institute of Technology, Meguro, Tokyo, Japan.
Kazuyoshi Murata *National Institute for Physiological Sciences, Okazaki, Aichi, Japan.
Hiroyuki Ogata *Institute for Chemical Research, Kyoto University, Gokasho, Uji, Kyoto, Japan ogata@kuicr.kyoto-u.ac.jp takemura@rs.kagu.tus.ac.jp.
Masaharu Takemura *Faculty of Science, Tokyo University of Science, Shinjuku, Tokyo, Japan ogata@kuicr.kyoto-u.ac.jp takemura@rs.kagu.tus.ac.jp.
National Institute for Physiological Sciences · JPKyoto University Institute for Chemical ResearchKyoto University · JPLife Science Institute · JPTokyo University of Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent discoveries of new large DNA viruses reveal high diversity in their morphologies, genetic repertoires, and replication strategies. Here, we report the novel features of medusavirus, a large DNA virus newly isolated from hot spring water in Japan. Medusavirus, with a diameter of 260 nm, shows a T=277 icosahedral capsid with unique spherical-headed spikes on its surface. It has a 381-kb genome encoding 461 putative proteins, 86 of which have their closest homologs in

Indexed as

DNA VirusesGenome, ViralPhylogenyWater MicrobiologyAcanthamoebaHot SpringsViral ProteinsViral ProteinsAcanthamoebacryo-electron microscopygenome sequencinggiant virushistonelateral gene transfermajor capsid proteinmolecular phylogenetic analysisNCLDV

Identifiers

PMID30728258
PMCPMC6450098
OpenAlexW2914126150

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.