Evidence map›Paper›PMID 30727960›Full record

ArticleBMC plant biology2019

Salt stress vs. salt shock - the case of sugar beet and its halophytic ancestor.

Monika Skorupa, Marcin Gołębiewski, Katarzyna Kurnik, Janusz Niedojadło, Jacek Kęsy, Krzysztof Klamkowski, Katarzyna Wójcik, Waldemar Treder, Andrzej Tretyn, Jarosław Tyburski

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
13.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 88 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Molecular phylogenetics and evolutionary history ofFrontiers in plant science · 2026
    Review
  6. Advances in Beet (Plants (Basel, Switzerland) · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Germination and Growth Characteristics ofPlants (Basel, Switzerland) · 2024
    Article
  12. Article
  13. Unique Features of the mInternational journal of molecular sciences · 2023
    Article
  14. Review
  15. Characteristic of the Ascorbate Oxidase Gene Family inInternational journal of molecular sciences · 2022
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Monika SkorupaCentre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University, Toruń, Poland.
Marcin GołębiewskiCentre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University, Toruń, Poland.
Katarzyna KurnikChair of Plant Physiology and Biotechnology, Faculty of Biology and Environment Protection, Nicolaus Copernicus University, Toruń, Poland.
Janusz NiedojadłoDepartment of Cellular and Molecular Biology, Faculty of Biology and Environment Protection, Nicolaus Copernicus University, Toruń, Poland.
Jacek KęsyChair of Plant Physiology and Biotechnology, Faculty of Biology and Environment Protection, Nicolaus Copernicus University, Toruń, Poland.
Krzysztof KlamkowskiResearch Institute of Horticulture, Skierniewice, Poland.
Katarzyna WójcikResearch Institute of Horticulture, Skierniewice, Poland.
Waldemar TrederResearch Institute of Horticulture, Skierniewice, Poland.
Andrzej TretynCentre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University, Toruń, Poland.
Jarosław TyburskiCentre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University, Toruń, Poland. tybr@umk.pl.ORCID http://orcid.org/0000-0002-8010-0380
Nicolaus Copernicus University · PLInstytut Ogrodnictwa – Państwowy Instytut Badawczy · PL

Funding

Narodowe Centrum Nauki 2014/13/B/NZ9/03790
6 · The paper itself

Abstract

backgroundSugar beet is a highly salt-tolerant crop. However, its ability to withstand high salinity is reduced compared to sea beet, a wild ancestor of all beet crops. The aim of this study was to investigate transcriptional patterns associated with physiological, cytological and biochemical mechanisms involved in salt response in these closely related subspecies. Salt acclimation strategies were assessed in plants subjected to either gradually increasing salt levels (salt-stress) or in excised leaves, exposed instantly to salinity (salt-shock).

resultThe majority of DEGs was down-regulated under stress, which may lead to certain aspects of metabolism being reduced in this treatment, as exemplified by lowered transpiration and photosynthesis. This effect was more pronounced in sugar beet. Additionally, sugar beet, but not sea beet, growth was restricted. Silencing of genes encoding numerous transcription factors and signaling proteins was observed, concomitantly with the up-regulation of lipid transfer protein-encoding genes and those coding for NRTs. Bark storage protein genes were up-regulated in sugar beet to the level observed in unstressed sea beet. Osmotic adjustment, manifested by increased water and proline content, occurred in salt-shocked leaves of both genotypes, due to the concerted activation of genes encoding aquaporins, ion channels and osmoprotectants synthesizing enzymes. bHLH137 was the only TF-encoding gene induced by salt in a dose-dependent manner irrespective of the mode of salt treatment. Moreover, the incidence of bHLH-binding motives in promoter regions of salinity-regulated genes was significantly greater than in non-regulated ones.

conclusionsMaintaining homeostasis under salt stress requires deeper transcriptomic changes in the sugar beet than in the sea beet. In both genotypes salt shock elicits greater transcriptomic changes than stress and it results in greater number of up-regulated genes compared to the latter. NRTs and bark storage protein may play a yet undefined role in salt stress-acclimation in beet. bHLH is a putative regulator of salt response in beet leaves and a promising candidate for further studies.

Indexed as

Abscisic AcidBeta vulgarisChlorophyllGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantPlant Growth RegulatorsPlant LeavesProlineQuantitative Trait, HeritableSalt StressSalt-Tolerant PlantsAbscisic AcidChlorophyllPlant Growth RegulatorsProlineBeta vulgarisRNA-SeqSalt shockSalt stressSea beetSugar beetTranscriptome

Identifiers

PMID30727960
PMCPMC6364445
OpenAlexW2920068896

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.