Evidence map›Paper›PMID 30723106›Full record

ArticleDevelopment (Cambridge, England)2019

Lineage-specific reorganization of nuclear peripheral heterochromatin and H3K9me2 domains.

Kelvin See, Yemin Lan, Joshua Rhoades, Rajan Jain, Cheryl L Smith, Jonathan A Epstein

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Epigenetics.Advances in experimental medicine and biology · 2024
    Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Three-dimensional chromatin organization in cardiac development and disease.Journal of molecular and cellular cardiology · 2021
    Review
  14. Article
  15. Article
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Kelvin SeeDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, PA 19104, USA.ORCID 0000-0003-0647-6977
Yemin LanDepartment of Cell and Developmental Biology, Perelman School of Medicine, University of Pennsylvania, PA 19104, USA.
Joshua RhoadesDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, PA 19104, USA.
Rajan JainDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, PA 19104, USA.
Cheryl L SmithDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, PA 19104, USA.
Jonathan A EpsteinDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, PA 19104, USA epsteinj@pennmedicine.upenn.edu.ORCID 0000-0001-8637-4465
California Institute for Regenerative Medicine · USUniversity of Pennsylvania · US

Funding

Cardiac lineage determination and nuclear architectureR35HL140018 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI EPSTEIN, JONATHAN A. · 2018 to 2024
$6.8M
Deciphering Nuclear Lamina-Chromatin Organization in Cellular Competence and Cardiac DevelopmentDP2HL147123 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI JAIN, RAJAN · 2018 to 2018
$2.4M
NHLBI NIH HHS DP2 HL147123NHLBI NIH HHS R35 HL140018
6 · The paper itself

Abstract

Dynamic organization of chromatin within the three-dimensional nuclear space has been postulated to regulate gene expression and cell fate. Here, we define the genome-wide distribution of nuclear peripheral heterochromatin as a multipotent P19 cell adopts either a neural or a cardiac fate. We demonstrate that H3K9me2-marked nuclear peripheral heterochromatin undergoes lineage-specific reorganization during cell-fate determination. This is associated with spatial repositioning of genomic loci away from the nuclear periphery as shown by 3D immuno-FISH. Locus repositioning is not always associated with transcriptional changes, but a subset of genes is upregulated.

Indexed as

Cell DifferentiationChromatin Assembly and DisassemblyCell LineHeterochromatinHistonesHumansMEF2 Transcription FactorsMultipotent Stem CellsMyocardinMyocytes, CardiacNeuronsNuclear ProteinsTrans-ActivatorsUp-RegulationHeterochromatinHistonesMEF2C protein, humanMEF2 Transcription FactorsMyocardinNuclear ProteinsTrans-ActivatorsH3K9me2 domainsNuclear architectureNuclear peripheral heterochromatin

Identifiers

PMID30723106
PMCPMC6382005
OpenAlexW2912402463

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.