Evidence map›Paper›PMID 30721421›Full record

ArticleMolecular biology reports2019

Silencing the OCT4-PG1 pseudogene reduces OCT-4 protein levels and changes characteristics of the multidrug resistance phenotype in chronic myeloid leukemia.

Aline Portantiolo Lettnin, Eduardo Felipe Wagner, Michele Carrett-Dias, Karina Dos Santos Machado, Adriano Werhli, Andrés Delgado Cañedo, Gilma Santos Trindade, Ana Paula de Souza Votto

Abstract read
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In one paragraph

Article in Molecular biology reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 32 citations in OpenAlex.

  1. Pseudogenes in the carcinogenesis: epithelial-to-mesenchymal transition process and cancer initiating cells.Reports of practical oncology and radiotherapy : journal of Greatpoland Cancer Center in Poznan and Polish Society of Radiation Oncology · 2025
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  11. PseudogeneFrontiers in genetics · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Aline Portantiolo LettninPost-Graduate Program in Physiological Sciences - PPGCF, Federal University of Rio Grande -FURG, Avenue Itália, Km 8, Rio Grande, RS, Zip Code 96203-900, Brazil.
Eduardo Felipe WagnerLaboratory of Cell Culture, Institute of Biological Sciences - ICB, Federal University of Rio Grande -FURG, Avenue Itália, Km 8, Rio Grande, RS, Zip Code 96203-900, Brazil.
Michele Carrett-DiasPost-Graduate Program in Physiological Sciences - PPGCF, Federal University of Rio Grande -FURG, Avenue Itália, Km 8, Rio Grande, RS, Zip Code 96203-900, Brazil.
Karina Dos Santos MachadoCenter of Computational Sciences - C3, Federal University of Rio Grande -FURG, Avenue Itália, Km 8, Rio Grande, RS, Zip Code 96203-900, Brazil.
Adriano WerhliCenter of Computational Sciences - C3, Federal University of Rio Grande -FURG, Avenue Itália, Km 8, Rio Grande, RS, Zip Code 96203-900, Brazil.
Andrés Delgado CañedoFederal University of Pampa - UNIPAMPA, Avenue Antônio Trilha, 1847, São Gabriel, RS, Zip Code 97300-000, Brazil.
Gilma Santos TrindadePost-Graduate Program in Physiological Sciences - PPGCF, Federal University of Rio Grande -FURG, Avenue Itália, Km 8, Rio Grande, RS, Zip Code 96203-900, Brazil.
Ana Paula de Souza VottoPost-Graduate Program in Physiological Sciences - PPGCF, Federal University of Rio Grande -FURG, Avenue Itália, Km 8, Rio Grande, RS, Zip Code 96203-900, Brazil. anavotto@yahoo.com.br.ORCID http://orcid.org/0000-0003-4057-8600
Universidade Federal do Rio Grande · BRUniversidade Federal do Pampa · BR

Funding

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior Finance Code 001National Program for Academic Cooperation (PROCAD/CAPES) [Grant Numbers 2951/2014]
6 · The paper itself

Abstract

Cancer stem cells show epigenetic plasticity and intrinsic resistance to anti-cancer therapy, rendering capable of initiating cancer relapse and progression. Transcription factor OCT-4 regulates various pathways in stem cells, but its expression can be regulated by pseudogenes. This work evaluated how OCT4-PG1 pseudogene can affect OCT-4 expression and mechanisms related to the multidrug resistance (MDR) phenotype in FEPS cells. Considering that OCT-4 protein is a transcription factor that regulates expression of ABC transporters, level of gene expression, activity of ABC proteins and cell sensitivity to chemotherapy were evaluated after OCT4-PG1 silencing. Besides we set up a STRING network. Results showed that after OCT4-PG1 silencing, cells expressed OCT-4 gene and protein to a lesser extent than mock cells. The gene and protein expression of ABCB1, as well as its activity were reduced. On the other hand, ALOX5 and ABCC1 genes was increased even as the activity of this transporter. Moreover, the silencing cells become sensitive to two chemotherapics tested. The network structure demonstrated that OCT4-PG1 protein interacts directly with OCT-4, SOX2, and NANOG and indirectly with ABC transporters. We conclude that OCT4-PG1 pseudogene plays a key role in the regulation OCT-4 transcription factor, which alters MDR phenotype in the FEPS cell line.

Indexed as

Arachidonate 5-LipoxygenaseATP-Binding Cassette, Sub-Family C ProteinsATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily BCell Line, TumorDrug Resistance, MultipleDrug Resistance, NeoplasmEmbryonic Stem CellsGene ExpressionGene SilencingHumansK562 CellsLeukemia, Myelogenous, Chronic, BCR-ABL PositiveNeoplastic Stem CellsOctamer Transcription Factor-3PhenotypeABCB1 protein, humanALOX5 protein, humanArachidonate 5-LipoxygenaseATP-Binding Cassette, Sub-Family C ProteinsATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily Bmultidrug resistance-associated protein 1Octamer Transcription Factor-3POU5F1 protein, humanSOXB1 Transcription FactorsABC transportersCancer stem cellsMRP1 proteinP-glycoproteinSTRING database

Identifiers

PMID30721421
OpenAlexW2913742946

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.