Evidence map›Paper›PMID 30719713›Full record

ArticleAnnals of human genetics2019

Genetic variants at the EGLN1 locus associated with high-altitude adaptation in Tibetans are absent or found at low frequency in highland Andeans.

Erica C Heinrich, Lu Wu, Elijah S Lawrence, Amy M Cole, Cecilia Anza-Ramirez, Francisco C Villafuerte, Tatum S Simonson

Open access · greenAbstract read
In one paragraph

Article in Annals of human genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 42 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Advances in Understanding Adaptive Hemoglobin Concentration at High Altitude.American journal of human biology : the official journal of the Human Biology Council · 2025
    Article
  8. Article
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  11. Review
  12. Review
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  16. Impacts of Changes in Atmospheric OFrontiers in physiology · 2021
    Review
  17. Article
  18. Effect ofBioMed research international · 2020
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Erica C HeinrichDivision of Physiology, Department of Medicine, University of California, San Diego, La Jolla, California.ORCID 0000-0002-6861-6165
Lu WuDivision of Physiology, Department of Medicine, University of California, San Diego, La Jolla, California.
Elijah S LawrenceDivision of Physiology, Department of Medicine, University of California, San Diego, La Jolla, California.
Amy M ColeDepartment of Molecular & Cellular Therapeutics, Royal College of Surgeons in Ireland, Dublin, Ireland.
Cecilia Anza-RamirezFacultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia (UPCH), Lima, Peru.
Francisco C VillafuerteFacultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia (UPCH), Lima, Peru.
Tatum S SimonsonDivision of Physiology, Department of Medicine, University of California, San Diego, La Jolla, California.
University of California San Diego · USUniversidad Peruana Cayetano Heredia · PERoyal College of Surgeons in Ireland · IEUniversity of California, Riverside · US

Funding

Respiratory and genomic contributions to adaptive/maladaptive hypoxia responsesR01HL145470 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SIMONSON, TATUM S · 2019 to 2023
$2.4M
Integrating Physiology and Genomics to Reveal Functional Adaptation in High-Altitude TibetansR00HL118215 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SIMONSON, TATUM S · 2015 to 2017
$744k
Genetic determinants of variation in the hypoxic ventilatory response in low- and high-altitude populationsF32HL131218 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HEINRICH, ERICA · 2016 to 2018
$127k
Integrating physiology and genomics to reveal functional adaptation in high-altitK99HL118215 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SIMONSON, TATUM S · 2014 to 2014
$85k
NHLBI NIH HHS F32 HL131218NHLBI NIH HHS K99 HL118215NHLBI NIH HHS R01 HL145470NIH HHS 5F32HL131218Science Foundation Ireland 12/IP/1727Wellcome TrustWellcome Trust 107544/Z/15/Z
6 · The paper itself

Abstract

EGLN1 encodes the hypoxia-inducible factor (HIF) pathway prolyl hydroxylase 2 (PHD2) that serves as an oxygen-sensitive regulator of HIF activity. The EGLN1 locus exhibits a signature of positive selection in Tibetan and Andean populations and is associated with hemoglobin concentration in Tibetans. Recent reports provide evidence for functional roles of protein-coding variants within the first exon of EGLN1 (rs186996510, rs12097901) that are linked to an adaptive signal in Tibetans, yet whether these same variants are present and contribute to adaptation in Andean highlanders is unknown. We determined the frequencies of these adaptive Tibetan alleles in Quechua Andeans resident at high altitude (4,350 m) in addition to individuals of Nepali ancestry resident at sea level. The rs186996510 C (minor) allele previously found at high frequency in Tibetans is absent in Andean (G: 100%) and rare among Nepali (C: 11.8%, G: 88.2%) cohorts. The minor G allele of rs12097901 is found at similarly low frequencies in Andeans (G: 12.7%, C: 87.3%) and Nepalis (G: 23.5%, C: 76.5%) compared to Tibetans. These results suggest that adaptation involving EGLN1 in Andeans involves different mechanisms than those described in Tibetans. The precise Andean adaptive variants remain to be determined.

Indexed as

AltitudeAdaptation, PhysiologicalAdultAgedAllelesExonsFemaleGene FrequencyGenotypeHumansHypoxia-Inducible Factor-Proline DioxygenasesMaleMiddle AgedNepalPeruPolymorphism, Single NucleotideEGLN1 protein, humanHypoxia-Inducible Factor-Proline DioxygenasesAndeanEGLN1high altituders12097901rs186996510Tibetan

Identifiers

PMID30719713
PMCPMC7920394
OpenAlexW2914620878

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.