Evidence map›Paper›PMID 30719424›Full record

ArticleFrontiers in oncology2018

Gene Expression and Methylation Analysis in Melanomas and Melanocytes From the Same Patient: Loss of NPM2 Expression Is a Potential Immunohistochemical Marker for Melanoma.

Susumu Fujiwara, Hiroshi Nagai, Haruki Jimbo, Naoe Jimbo, Tomoyo Tanaka, Masukazu Inoie, Chikako Nishigori

Open access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Development of a Macrophage-Related Risk Model for Metastatic Melanoma.International journal of molecular sciences · 2023
    Article
  10. Article
  11. Article
  12. Review
  13. Frontiers in genetics · 2022
    Article
  14. Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Susumu FujiwaraDivision of Dermatology, Department of Internal Related, Kobe University Graduate School of Medicine, Chuo-ku, Japan.
Hiroshi NagaiDivision of Dermatology, Department of Internal Related, Kobe University Graduate School of Medicine, Chuo-ku, Japan.
Haruki JimboDivision of Dermatology, Department of Internal Related, Kobe University Graduate School of Medicine, Chuo-ku, Japan.
Naoe JimboDepartment of Diagnostic Pathology, Kobe University Graduate School of Medicine, Chuo-ku, Japan.
Tomoyo TanakaR&D Department, Japan Tissue Engineering Co., Ltd, Gamagori, Japan.
Masukazu InoieR&D Department, Japan Tissue Engineering Co., Ltd, Gamagori, Japan.
Chikako NishigoriDivision of Dermatology, Department of Internal Related, Kobe University Graduate School of Medicine, Chuo-ku, Japan.
Kobe University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA methylation is considered the primary epigenetic mechanism underlying the development of malignant melanoma. Since DNA methylation can be influenced by environmental factors, it is preferable to compare cancer and normal cells from the same patient. In order to compare the methylation status in melanoma tissues and melanocytes from the same individuals, we employed a novel epidermal sheet cultivation technique to isolate normal melanocytes from unaffected sites of melanoma patients. We also analyzed primary and metastatic melanoma samples, three commercially available melanocytes, and four melanoma cell lines. Cluster analysis of DNA methylation data classified freshly isolated melanomas and melanocytes into the same group, whereas the four melanoma cell lines were clustered together in a distant clade. Moreover, our analysis discovered methylation at several novel loci (

Indexed as

epigeneticsmelanocytemelanomamethylationneviNPM2

Identifiers

PMID30719424
PMCPMC6348333
OpenAlexW2909719596

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.