Evidence map›Paper›PMID 30718896›Full record

ArticleScientific reports2019

Anaerobic degradation of hexadecane and phenanthrene coupled to sulfate reduction by enriched consortia from northern Gulf of Mexico seafloor sediment.

Boryoung Shin, Minjae Kim, Karsten Zengler, Kuk-Jeong Chin, Will A Overholt, Lisa M Gieg, Konstantinos T Konstantinidis, Joel E Kostka

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Boryoung ShinSchool of Earth and Atmospheric Sciences, Georgia Institute of Technology, Atlanta, 30332, USA.
Minjae KimSchool of Civil and Environmental Engineering, Georgia Institute of Technology, Atlanta, 30332, USA.
Karsten ZenglerDepartment of Pediatrics, University of California, San Diego, 92093, USA.ORCID 0000-0002-8062-3296
Kuk-Jeong ChinDepartment of Biology, Georgia State University, Atlanta, 30302, USA.
Will A OverholtSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, 30332, USA.
Lisa M GiegDepartment of Biological Sciences, University of Calgary, Calgary, T2N 1N4, Canada.
Konstantinos T KonstantinidisSchool of Civil and Environmental Engineering, Georgia Institute of Technology, Atlanta, 30332, USA.
Joel E KostkaSchool of Earth and Atmospheric Sciences, Georgia Institute of Technology, Atlanta, 30332, USA. joel.kostka@biology.gatech.edu.ORCID 0000-0003-3051-1330
Georgia Institute of Technology · USGeorgia State University · USUniversity of Calgary · CAUniversity of San Diego · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To advance understanding of the fate of hydrocarbons released from the Deepwater Horizon oil spill and deposited in marine sediments, this study characterized the microbial populations capable of anaerobic hydrocarbon degradation coupled with sulfate reduction in non-seep sediments of the northern Gulf of Mexico. Anaerobic, sediment-free enrichment cultures were obtained with either hexadecane or phenanthrene as sole carbon source and sulfate as a terminal electron acceptor. Phylogenetic analysis revealed that enriched microbial populations differed by hydrocarbon substrate, with abundant SSU rRNA gene amplicon sequences from hexadecane cultures showing high sequence identity (up to 98%) to Desulfatibacillum alkenivorans (family Desulfobacteraceae), while phenanthrene-enriched populations were most closely related to Desulfatiglans spp. (up to 95% sequence identity; family Desulfarculaceae). Assuming complete oxidation to CO

Identifiers

PMID30718896
PMCPMC6361983
OpenAlexW2925119924

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.