Evidence map›Paper›PMID 30718847›Full record

ArticleNature microbiology2019

In plaque-mass spectrometry imaging of a bloom-forming alga during viral infection reveals a metabolic shift towards odd-chain fatty acid lipids.

Guy Schleyer, Nir Shahaf, Carmit Ziv, Yonghui Dong, Roy A Meoded, Eric J N Helfrich, Daniella Schatz, Shilo Rosenwasser, Ilana Rogachev, Asaph Aharoni and 2 more

Abstract read
In one paragraph

Article in Nature microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
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  7. Spatial Metabolomics and Its Application in Plant Research.International journal of molecular sciences · 2025
    Review
  8. Soil viral-host interactions regulate microplastic-dependent carbon storage.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Article
  10. Review
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  13. Article
  14. Article
  15. Article
  16. Article
  17. Lipid biomarkers for algal resistance to viral infection in the ocean.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Guy SchleyerDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
Nir ShahafDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
Carmit ZivDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
Yonghui DongDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
Roy A MeodedInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.
Eric J N HelfrichInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.
Daniella SchatzDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.ORCID http://orcid.org/0000-0003-2740-8391
Shilo RosenwasserDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
Ilana RogachevDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
Asaph AharoniDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
Jörn PielInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.ORCID http://orcid.org/0000-0002-2282-8154
Assaf VardiDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel. assaf.vardi@weizmann.ac.il.ORCID http://orcid.org/0000-0002-7079-0234
Weizmann Institute of Science · ILETH Zurich · CHAgricultural Research Organization · ILHebrew University of Jerusalem · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tapping into the metabolic crosstalk between a host and its virus can reveal unique strategies employed during infection. Viral infection is a dynamic process that generates an evolving metabolic landscape. Gaining a continuous view into the infection process is highly challenging and is limited by current metabolomics approaches, which typically measure the average of the entire population at various stages of infection. Here, we took an innovative approach to study the metabolic basis of host-virus interactions between the bloom-forming alga Emiliania huxleyi and its specific virus. We combined a classical method in virology, the plaque assay, with advanced mass spectrometry imaging (MSI), an approach we termed 'in plaque-MSI'. Taking advantage of the spatial characteristics of the plaque, we mapped the metabolic landscape induced during infection in a high spatiotemporal resolution, unfolding the infection process in a continuous manner. Further unsupervised spatially aware clustering, combined with known lipid biomarkers, revealed a systematic metabolic shift during infection towards lipids containing the odd-chain fatty acid pentadecanoic acid (C15:0). Applying 'in plaque-MSI' may facilitate the discovery of bioactive compounds that mediate the chemical arms race of host-virus interactions in diverse model systems.

Indexed as

EutrophicationHost Microbial InteractionsMass SpectrometryFatty AcidsHaptophytaMetabolomicsPhycodnaviridaeSpatio-Temporal AnalysisViral Plaque AssayVirus DiseasesFatty Acidspentadecanoic acid

Identifiers

PMID30718847
PMCPMC6420086
OpenAlexW2913005912

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.