Evidence map›Paper›PMID 30718694›Full record

ArticleScientific reports2019

Spectrum of Microbial Sequences and a Bacterial Cell Wall Antigen in Primary Demyelination Brain Specimens Obtained from Living Patients.

John D Kriesel, Preetida Bhetariya, Zheng-Ming Wang, David Renner, Cheryl Palmer, Kael F Fischer

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Review
  9. Article
  10. Targeting the gut to treat multiple sclerosis.The Journal of clinical investigation · 2021
    Review
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

John D KrieselDepartment of Internal Medicine, Division of Infectious Diseases, University of Utah School of Medicine, Salt Lake City, Utah, 84132, USA. john.kriesel@hsc.utah.edu.
Preetida BhetariyaDepartment of Internal Medicine, Division of Infectious Diseases, University of Utah School of Medicine, Salt Lake City, Utah, 84132, USA.
Zheng-Ming WangDepartment of Pediatrics, University of Utah School of Medicine, Salt Lake City, Utah, 84132, USA.
David RennerDepartment of Neurology, University of Utah School of Medicine, Salt Lake City, Utah, 84132, USA.
Cheryl PalmerDepartment of Pathology, University of Utah School of Medicine, Salt Lake City, Utah, 84132, USA.
Kael F FischerDepartment of Pathology, University of Utah School of Medicine, Salt Lake City, Utah, 84132, USA.
University of Utah · USEchelon Biosciences · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Multiple sclerosis (MS) is an autoimmune disease characterized by multiple lesions in the brain and spinal cord. We used RNA sequencing to identify microbial sequences and characterize human gene expression patterns in 30 human brain biopsy specimens. RNAs which aligned to known microbial taxa, were significantly enriched in 10 of 12 primary demyelination (MS) brain specimens compared to a group of 15 epilepsy controls, leading to a list of 29 MS microbial candidate genera from 11 different phyla. Most of the candidate MS microbes are anaerobic bacteria. While there were some shared candidates, each of the 10 MS samples with significant microbial RNA enrichment had a distinct set microbial candidates. The fraction of microbial sequencing reads was greater for the MS group (128.8 PPM) compared to the controls (77.4 PPM, p = 0.016). Bacterial peptidoglycan was demonstrated in brain tissue sections from several MS subjects. Human gene expression analysis showed increased expression of inflammation-related pathways in the MS group. This data shows that demyelinating brain lesions are associated with the presence of microbial RNA sequences and bacterial antigen. This suggests that MS is triggered by the presence of a diverse set of microbes within a lesion.

Indexed as

AdolescentAdultAgedAntigens, BacterialBrainCell WallDemyelinating DiseasesFemaleGene Expression RegulationHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedMultiple SclerosisPhylogenyYoung AdultAntigens, Bacterial

Identifiers

PMID30718694
PMCPMC6362190
OpenAlexW2911956863

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.