ArticleNature communications2019
Single-molecule sequencing detection of N6-methyladenine in microbial reference materials.
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In one paragraph
Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 104 papers.
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104citing papers in PubMed
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Who cites it
104 citing papers in PubMed.
- Decoding chromosome organization using proximity labeling and long-read sequencing.Journal of genetics and genomics = Yi chuan xue bao · 2026Article
- VeloRM: disentangling pre- and post-splicing RNA modification dynamics at single-cell resolution.Nucleic acids research · 2026Article
- Long-read sequencing technologies and bioinformatics: a new perspective for decoding DNA methylation modifications.Journal of translational medicine · 2026Review
- MethyNano: supervised contrastive pretraining enables robust and generalizable methylation detection from nanopore sequencing.Bioinformatics (Oxford, England) · 2026Article
- DamageFormer: a damage-aware multimodal deep learning framework for DNA lesion identification from nanopore sequencing.bioRxiv : the preprint server for biology · 2026Article
- A pentose, as a cytosine nucleobase modification inApplied and environmental microbiology · 2026Article
- Multifactorial and multiplexed epigenomic profiling of five DNA modifications in plants with mDIP-seq.Science China. Life sciences · 2026Article
- Nanopore-mFrontiers in genetics · 2026Article
- DirectRM: integrated detection of landscape and crosstalk between multiple RNA modifications using direct RNA sequencing.Nature communications · 2025Article
- m6A modification of non‑coding RNA: Mechanisms, functions and potential values in human diseases (Review).International journal of molecular medicine · 2025Review
- Dam-dependent epigenetic memory regulates prophage reintegration in Salmonella.Nucleic acids research · 2025Article
- Identifying DNA methylation types and methylated base positions from bacteria using nanopore sequencing with multi-scale neural network.Bioinformatics (Oxford, England) · 2025Article
- Integrating Artificial Intelligence in Next-Generation Sequencing: Advances, Challenges, and Future Directions.Current issues in molecular biology · 2025Review
- Biases from Oxford Nanopore library preparation kits and their effects on microbiome and genome analysis.BMC genomics · 2025Article
- Comprehensive comparison of the third-generation sequencing tools for bacterial 6mA profiling.Nature communications · 2025Article
- Decoding bacterial methylomes in four public health-relevant microbial species: nanopore sequencing enables reproducible analysis of DNA modifications.BMC genomics · 2025Article
- Transformer-based deep learning for accurate detection of multiple base modifications using single molecule real-time sequencing.Communications biology · 2025Article
- Statistical modeling of single-cell epitranscriptomics enabled trajectory and regulatory inference of RNA methylation.Cell genomics · 2025Article
- Quantitative detection of DNA methylation from nanopore sequencing data without raw signals.GigaScience · 2025Article
- MethylomeMiner: A novel tool for high-resolution analysis of bacterial methylation patterns from nanopore sequencing.Computational and structural biotechnology journal · 2025Article
44 more citing papers are in PubMed but not listed here.
Corrections and comments
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Authors and funding
7 authors.
Alexa B R McIntyreDepartment of Physiology and Biophysics, Weill Cornell Medicine, New York, 10065, NY, USA.
Noah AlexanderDepartment of Physiology and Biophysics, Weill Cornell Medicine, New York, 10065, NY, USA.
Kirill GrigorevDepartment of Physiology and Biophysics, Weill Cornell Medicine, New York, 10065, NY, USA.
Daniela BezdanDepartment of Physiology and Biophysics, Weill Cornell Medicine, New York, 10065, NY, USA.
Heike SichtigUS Food and Drug Administration, Silver Spring, 20993, MD, USA.
Charles Y ChiuDepartment of Laboratory Medicine, University of California San Francisco, San Francisco, 94107, CA, USA.ORCID http://orcid.org/0000-0003-2915-2094
Christopher E MasonDepartment of Physiology and Biophysics, Weill Cornell Medicine, New York, 10065, NY, USA. chm2042@med.cornell.edu.ORCID http://orcid.org/0000-0002-1850-1642
Funding
Epigenome Interactions in Complex Neurogenetic DisordersR01NS076465 · NINDS · WEILL MEDICAL COLL OF CORNELL UNIV · PI MASON, CHRISTOPHER EDWARD, ROSS, MARGARET ELIZABETH · 2011 to 2015
$5.8MDefining the role of the RNA modification N6-methyladenosine in the hepatitis C virus lifecycleR01AI125416 · NIAID · DUKE UNIVERSITY · PI Stacy Michelle Horner · 2016 to 2026
$5.5MThe Spatiotemporal Landscape of the Human Brain EpitranscriptomeR01MH117406 · NIMH · WEILL MEDICAL COLL OF CORNELL UNIV · PI MASON, CHRISTOPHER EDWARD · 2018 to 2022
$3.3MStudy of Neural Tube Defects Etiology: Genome and ExposomeR01ES021006 · NIEHS · UNIVERSITY OF TEXAS AT AUSTIN · PI FINNELL, RICHARD H., MASON, CHRISTOPHER EDWARD · 2012 to 2014
$1.0MCommunity Research Education and Engagement for Data Science (CREEDS)R25EB020393 · NIBIB · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI CLAUDIO, LUZ, KOVATCH, PATRICIA · 2015 to 2017
$578kMapping the RNA modification N6-methyladenosine during Zika virus infectionR21AI129851 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI HORNER, STACY MICHELLE, MASON, CHRISTOPHER EDWARD · 2017 to 2018
$469kNIAID NIH HHS R01 AI125416NIAID NIH HHS R21 AI129851NIBIB NIH HHS R25 EB020393NIEHS NIH HHS R01 ES021006NIH HHS 1R21AI129851NIH HHS R01AI125416NIH HHS R01ES021006NIH HHS R01NS076465NIH HHS R25EB020393NIMH NIH HHS R01 MH117406NINDS NIH HHS R01 NS076465
Abstract
The DNA base modification N6-methyladenine (m
Indexed as
AdenosineAlgorithmsDNA MethylationImmunoprecipitationSequence Analysis, DNASoftwareAdenosineN-methyladenosine
Identifiers
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.