Evidence map›Paper›PMID 30713700›Full record

ArticleIUCrJ2019

Thresholding of cryo-EM density maps by false discovery rate control.

Maximilian Beckers, Arjen J Jakobi, Carsten Sachse

Abstract read
In one paragraph

Article in IUCrJ, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Validation of helical symmetry parameters in the EMDB.Acta crystallographica. Section D, Structural biology · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. In-cell Structure and Variability of Pyrenoid Rubisco.bioRxiv : the preprint server for biology · 2025
    Article
  12. Article
  13. Ligand Identification in CryoEM and X-ray Maps Using Deep Learning.bioRxiv : the preprint server for biology · 2024
    Article
  14. Article
  15. Automated model-free analysis of cryo-EM volume ensembles with SIREn.bioRxiv : the preprint server for biology · 2024
    Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Maximilian BeckersStructural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Meyerhofstrasse 1, 69117 Heidelberg, Germany.ORCID https://orcid.org/0000-0001-5988-1322
Arjen J JakobiStructural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Meyerhofstrasse 1, 69117 Heidelberg, Germany.ORCID https://orcid.org/0000-0002-7761-2027
Carsten SachseStructural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Meyerhofstrasse 1, 69117 Heidelberg, Germany.ORCID https://orcid.org/0000-0002-1168-5143

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cryo-EM now commonly generates close-to-atomic resolution as well as intermediate resolution maps from macromolecules observed in isolation and

Indexed as

cryo-EM densityelectron cryo-microscopyfalse discovery rateligand bindinglocal resolutionsignal detectionsubtomogram averaging

Identifiers

PMID30713700
PMCPMC6327189

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.