Evidence map›Paper›PMID 30713161›Full record

ArticleActa crystallographica. Section F, Structural biology communications2019

Crystallization and X-ray analysis of monodisperse human properdin.

Dennis Vestergaard Pedersen, Margot Revel, Trine Amalie Fogh Gadeberg, Gregers Rom Andersen

Open access · greenAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Dennis Vestergaard PedersenDepartment of Molecular Biology and Genetics, Aarhus University, Gustav Wiedsvej 10C, DK-8000 Aarhus, Denmark.
Margot RevelDepartment of Molecular Biology and Genetics, Aarhus University, Gustav Wiedsvej 10C, DK-8000 Aarhus, Denmark.
Trine Amalie Fogh GadebergDepartment of Molecular Biology and Genetics, Aarhus University, Gustav Wiedsvej 10C, DK-8000 Aarhus, Denmark.
Gregers Rom AndersenDepartment of Molecular Biology and Genetics, Aarhus University, Gustav Wiedsvej 10C, DK-8000 Aarhus, Denmark.ORCID 0000-0001-6292-3319
Aarhus University · DK

Funding

Lundbeckfonden BRAINSTRUCNatur og Univers, Det Frie Forskningsråd DFF-4181-00137Novo Nordisk Fonden 29880
6 · The paper itself

Abstract

The 54 kDa protein properdin, also known as factor P (FP), plays a major role in the complement system through the stabilization of the alternative pathway convertases. FP circulates in the blood as cyclic dimers, trimers and tetramers, and this heterogeneity challenges detailed structural insight into the mechanism of convertase stabilization by FP. Here, the generation of an intact FP monomer and a variant monomer with the third thrombospondin repeat liberated is described. Both FP monomers were excised from recombinant full-length FP containing internal cleavage sites for TEV protease. These FP monomers could be crystallized, and complete data sets extending to 2.8 Å resolution for the intact FP monomer and to 3.5 Å resolution for the truncated variant were collected. The principle of specific monomer excision and domain removal by the insertion of a protease cleavage site may be broadly applicable to structural studies of oligomeric, flexible and modular proteins.

Indexed as

Amino Acid SequenceCrystallizationCrystallography, X-RayEndopeptidasesHumansModels, MolecularProperdinProtein BindingProtein ConformationSequence HomologyEndopeptidasesProperdinTEV proteasecomplementcrystallizationmodular proteinsproperdin

Identifiers

PMID30713161
PMCPMC6360440
OpenAlexW2912024260

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.