Evidence map›Paper›PMID 30713157›Full record

ArticleActa crystallographica. Section F, Structural biology communications2019

Crystal structure of the programmed cell death 5 protein from Sulfolobus solfataricus.

Kuan Fu Lin, Jia Yuan Hsu, Dong Lin Hsieh, Meng Ju Tsai, Ching Hui Yeh, Chin Yu Chen

Open access · greenAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 99% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Kuan Fu LinDepartment of Life Sciences, National Central University, 300 Zhongda Road, Zhongli District, Taoyuan City 32001, Taiwan.
Jia Yuan HsuDepartment of Life Sciences, National Central University, 300 Zhongda Road, Zhongli District, Taoyuan City 32001, Taiwan.
Dong Lin HsiehDepartment of Life Sciences, National Central University, 300 Zhongda Road, Zhongli District, Taoyuan City 32001, Taiwan.
Meng Ju TsaiDepartment of Life Sciences, National Central University, 300 Zhongda Road, Zhongli District, Taoyuan City 32001, Taiwan.
Ching Hui YehDepartment of Life Sciences, National Central University, 300 Zhongda Road, Zhongli District, Taoyuan City 32001, Taiwan.
Chin Yu ChenDepartment of Life Sciences, National Central University, 300 Zhongda Road, Zhongli District, Taoyuan City 32001, Taiwan.
National Central University · TW

Funding

Ministry of Science and Technology of Taiwan MOST 106-2113-M-008-011
6 · The paper itself

Abstract

Programmed cell death 5 (PDCD5) is a vital signaling protein in the apoptosis pathway in eukaryotes. It is known that there are two dissociated N-terminal regions and a triple-helix core in eukaryotic PDCD5. Structural and functional studies of PDCD5 from hyperthermophilic archaea have been limited to date. Here, the PDCD5 homolog Sso0352 (SsoPDCD5) was identified in Sulfolobus solfataricus, the SsoPDCD5 protein was expressed and crystallized, and the phase was identified by single-wavelength anomalous diffraction. The native SsoPDCD5 crystal belonged to space group C2 and diffracted to 1.49 Å resolution. This is the first crystal structure of a PDCD5 homolog to be solved. SsoPDCD5 shares a similar triple-helix bundle with eukaryotic PDCD5 but has a long α-helix in the N-terminus. A structural search and biochemical data suggest that SsoPDCD5 may function as a DNA-binding protein.

Indexed as

Amino Acid SequenceApoptosis Regulatory ProteinsCrystallizationCrystallography, X-RayHumansModels, MolecularNeoplasm ProteinsProtein BindingProtein ConformationSequence HomologySulfolobus solfataricusApoptosis Regulatory ProteinsNeoplasm ProteinsPDCD5 protein, humanDNA-binding proteinPDCDSprogrammed cell deathSulfolobus solfataricusX-ray crystallography

Identifiers

PMID30713157
PMCPMC6360439
OpenAlexW2912595204

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.