Evidence map›Paper›PMID 30713099›Full record

ArticleCell host & microbe2019

Recurrent Loss-of-Function Mutations Reveal Costs to OAS1 Antiviral Activity in Primates.

Clayton M Carey, Apurva A Govande, Juliane M Cooper, Melissa K Hartley, Philip J Kranzusch, Nels C Elde

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
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  8. Article
  9. Recurrent viral capture of cellular phosphodiesterases that antagonize OAS-RNase L.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Article
  11. Article
  12. The Many Faces of Oligoadenylate Synthetases.Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research · 2023
    Review
  13. Article
  14. Origin of the OAS-RNase L innate immune pathway before the rise of jawed vertebrates via molecular tinkering.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Clayton M CareyDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Apurva A GovandeDepartment of Microbiology and Immunobiology, Harvard Medical School, Boston, MA 02115, USA; Department of Cancer Immunology and Virology, Dana-Farber Cancer Institute, Boston, MA 02115, USA.
Juliane M CooperDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Melissa K HartleyDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Philip J KranzuschDepartment of Microbiology and Immunobiology, Harvard Medical School, Boston, MA 02115, USA; Department of Cancer Immunology and Virology, Dana-Farber Cancer Institute, Boston, MA 02115, USA.
Nels C EldeDepartment of Human Genetics, University of Utah School of Medicine, Salt Lake City, UT 84112, USA. Electronic address: nelde@genetics.utah.edu.
University of Utah · USHarvard University · US

Funding

X-ray Cryst. CoreP50GM082545 · NIGMS · UNIVERSITY OF UTAH · PI SUNDQUIST, WESLEY I. · 2007 to 2018
$51.1M
Training Program in Microbial PathogenesisT32AI055434 · NIAID · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI MULVEY, MATTHEW A, PLANELLES, VICENTE · 2004 to 2025
$6.0M
Evolutionary innovations from host-microbe interactionsR35GM134936 · NIGMS · UNIVERSITY OF UTAH · PI ELDE, NELS C. · 2020 to 2024
$1.7M
Mechanisms of mimicry underlying the evolution of a model poxvirusR01GM114514 · NIGMS · UNIVERSITY OF UTAH · PI ELDE, NELS C. · 2015 to 2019
$1.6M
NIAID NIH HHS T32 AI055434NIGMS NIH HHS P50 GM082545NIGMS NIH HHS R01 GM114514NIGMS NIH HHS R35 GM134936Wellcome Trust
6 · The paper itself

Abstract

Immune responses counteract infections but also cause collateral damage to hosts. Oligoadenylate synthetase 1 (OAS1) binds double-stranded RNA from invading viruses and produces 2'-5' linked oligoadenylate (2-5A) to activate ribonuclease L (RNase L), which cleaves RNA to inhibit virus replication. OAS1 can also undergo autoactivation by host RNAs, a potential trade-off to antiviral activity. We investigated functional variation in primate OAS1 as a model for how immune pathways evolve to mitigate costs and observed a surprising frequency of loss-of-function variation. In gorillas, we identified a polymorphism that severely decreases catalytic function, mirroring a common variant in humans that impairs 2-5A synthesis through alternative splicing. OAS1 loss-of-function variation is also common in monkeys, including complete loss of 2-5A synthesis in tamarins. The frequency of loss-of-function alleles suggests that costs associated with OAS1 activation can be so detrimental to host fitness that pathogen-protective effects are repeatedly forfeited.

Indexed as

Mutation2',5'-Oligoadenylate SynthetaseAdenine NucleotidesAmino Acid SequenceAnimalsAntiviral AgentsEndoribonucleasesEvolution, MolecularGenetic VariationHaplorhiniHumansModels, MolecularOligoribonucleotidesPrimatesProtein ConformationRNA, Double-Stranded2-5A-dependent ribonuclease2',5'-oligoadenylate2',5'-Oligoadenylate SynthetaseAdenine NucleotidesAntiviral AgentsEndoribonucleasesOAS1 protein, humanOligoribonucleotidesRNA, Double-Strandeddouble-stranded RNAdsRNAloss-of-function mutationOAS1oligoadenylate synthetase 1polymorphismprimatesrapid evolutionRNase Lyeast

Identifiers

PMID30713099
PMCPMC6609161
OpenAlexW2952443114

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.