Evidence map›Paper›PMID 30712990›Full record

ArticleMolecular cell2019

Ribosomal Proteins Regulate MHC Class I Peptide Generation for Immunosurveillance.

Jiajie Wei, Rigel J Kishton, Matthew Angel, Crystal S Conn, Nicole Dalla-Venezia, Virginie Marcel, Anne Vincent, Frédéric Catez, Sabrina Ferré, Lilia Ayadi and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 121 citations in OpenAlex.

  1. Article
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  11. Review
  12. High-throughput approaches for the identification of ribosome heterogeneity.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  13. Article
  14. Complement C3d enables cell-mediated immunity capable of distinguishing spontaneously transformed from nontransformed cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Article
  16. Intricate ribosome composition and translational reprogramming in epithelial-mesenchymal transition.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  17. Article
  18. Review
  19. Article
  20. Tumor Antigens beyond the Human Exome.International journal of molecular sciences · 2024
    Review

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 8 institutions in 3 countries.

Jiajie WeiLaboratory of Viral Diseases, National Institute of Allergy and Infectious Diseases, NIH, Bethesda, MD 20892, USA. Electronic address: weijiajie@gmail.com.
Rigel J KishtonNational Cancer Institute, NIH, Bethesda, MD 20892, USA.
Matthew AngelLaboratory of Viral Diseases, National Institute of Allergy and Infectious Diseases, NIH, Bethesda, MD 20892, USA.
Crystal S ConnDivision of Nutritional Sciences, Cornell University, Ithaca, NY 14853, USA.
Nicole Dalla-VeneziaUniversity of Lyon, Université Claude Bernard Lyon 1, INSERM 1052, CNRS 5286, Center Léon Bérard, Center de Recherche en Cancérologie de Lyon, Lyon, 69373 Cedex 08, France.
Virginie MarcelUniversity of Lyon, Université Claude Bernard Lyon 1, INSERM 1052, CNRS 5286, Center Léon Bérard, Center de Recherche en Cancérologie de Lyon, Lyon, 69373 Cedex 08, France.
Anne VincentUniversity of Lyon, Université Claude Bernard Lyon 1, INSERM 1052, CNRS 5286, Center Léon Bérard, Center de Recherche en Cancérologie de Lyon, Lyon, 69373 Cedex 08, France.
Frédéric CatezUniversity of Lyon, Université Claude Bernard Lyon 1, INSERM 1052, CNRS 5286, Center Léon Bérard, Center de Recherche en Cancérologie de Lyon, Lyon, 69373 Cedex 08, France.
Sabrina FerréUniversity of Grenoble Alpes, CEA, INSERM, BIG-BGE, 38000 Grenoble, France.
Lilia AyadiNext-Generation Sequencing Core Facility, UMS2008 IBSLor CNRS-INSERM-University of Lorraine, 54505 Vandoeuvre-les-Nancy, France; Laboratory IMoPA, UMR7365 CNRS-University of Lorraine, 54505 Vandoeuvre-les-Nancy, France.
Virginie MarchandNext-Generation Sequencing Core Facility, UMS2008 IBSLor CNRS-INSERM-University of Lorraine, 54505 Vandoeuvre-les-Nancy, France; Laboratory IMoPA, UMR7365 CNRS-University of Lorraine, 54505 Vandoeuvre-les-Nancy, France.
Devin DershLaboratory of Viral Diseases, National Institute of Allergy and Infectious Diseases, NIH, Bethesda, MD 20892, USA.
James S GibbsLaboratory of Viral Diseases, National Institute of Allergy and Infectious Diseases, NIH, Bethesda, MD 20892, USA.
Ivaylo P IvanovLaboratory of Gene Regulation and Development, Eunice Kennedy Shriver National Institute of Child Health and Human Development, NIH, Bethesda, MD 20892, USA.
Nathan FridlyandLaboratory of Translational Biology, School of Biosciences and Biotechnology, University of Camerino, Camerino MC 62032, Italy.
Yohann CoutéUniversity of Grenoble Alpes, CEA, INSERM, BIG-BGE, 38000 Grenoble, France.
Jean-Jacques DiazUniversity of Lyon, Université Claude Bernard Lyon 1, INSERM 1052, CNRS 5286, Center Léon Bérard, Center de Recherche en Cancérologie de Lyon, Lyon, 69373 Cedex 08, France.
Shu-Bing QianDivision of Nutritional Sciences, Cornell University, Ithaca, NY 14853, USA.
Louis M StaudtLymphoid Malignancies Branch, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Nicholas P RestifoNational Cancer Institute, NIH, Bethesda, MD 20892, USA; Center for Cell-Based Therapy, Center for Cancer Research, NIH, Bethesda, MD 20892, USA.
Jonathan W YewdellLaboratory of Viral Diseases, National Institute of Allergy and Infectious Diseases, NIH, Bethesda, MD 20892, USA. Electronic address: jyewdell@niaid.nih.gov.
National Institute of Allergy and Infectious Diseases · USUniversité Claude Bernard Lyon 1 · FRNational Cancer Institute · USCentre National de la Recherche Scientifique · FRCornell University · USInserm · FREunice Kennedy Shriver National Institute of Child Health and Human Development · USUniversità di Camerino · IT

Funding

Building on the success of the adoptive immunotherapy of cancerZIABC010763 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI ROSENBERG, STEVEN · 2009 to 2020
$25.0M
Translation in ImmunityZIAAI001210 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI YEWDELL, JONATHAN W · 2016 to 2025
$12.5M
PROCESSING OF VIRAL PROTEINS FOR T CELL RECOGNITIONZ01AI000542 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI YEWDELL, JONATHAN W · 1988 to 2008
$1.6M
Linking Nutrient Signaling and Protein Homeostasis in Mammalian AgingR01AG042400 · NIA · CORNELL UNIVERSITY · PI QIAN, SHU-BING · 2013 to 2017
$1.6M
Intramural NIH HHS Z01 AI000542NIA NIH HHS R01 AG042400
6 · The paper itself

Abstract

The MHC class I antigen presentation system enables T cell immunosurveillance of cancers and viruses. A substantial fraction of the immunopeptidome derives from rapidly degraded nascent polypeptides (DRiPs). By knocking down each of the 80 ribosomal proteins, we identified proteins that modulate peptide generation without altering source protein expression. We show that 60S ribosomal proteins L6 (RPL6) and RPL28, which are adjacent on the ribosome, play opposite roles in generating an influenza A virus-encoded peptide. Depleting RPL6 decreases ubiquitin-dependent peptide presentation, whereas depleting RPL28 increases ubiquitin-dependent and -independent peptide presentation. 40S ribosomal protein S28 (RPS28) knockdown increases total peptide supply in uninfected cells by increasing DRiP synthesis from non-canonical translation of "untranslated" regions and non-AUG start codons and sensitizes tumor cells for T cell targeting. Our findings raise the possibility of modulating immunosurveillance by pharmaceutical targeting ribosomes.

Indexed as

Antigen PresentationAnimalsCell Line, TumorCoculture TechniquesHEK293 CellsHistocompatibility Antigens Class IHost-Pathogen InteractionsHumansImmunologic SurveillanceInfluenza A virusMelanomaMice, Inbred C57BLMice, TransgenicRibosomal ProteinsRibosome Subunits, Large, EukaryoticRibosome Subunits, Small, EukaryoticHistocompatibility Antigens Class Iribosomal protein L6Ribosomal ProteinsRPL28 protein, humanRPS28 protein, humanimmunosurveillanceMHC-I antigen presentationribosomal protein

Identifiers

PMID30712990
PMCPMC6697054
OpenAlexW2913415147

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.