Evidence map›Paper›PMID 30712189›Full record

ArticleExtremophiles : life under extreme conditions2019

The bacterial diversity on steam vents from Paricutín and Sapichu volcanoes.

Elcia Margareth Souza Brito, Víctor Manuel Romero-Núñez, César Augusto Caretta, Pierre Bertin, Julio César Valerdi-Negreros, Rémy Guyoneaud, Marisol Goñi-Urriza

Abstract read
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In one paragraph

Article in Extremophiles : life under extreme conditions, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Elcia Margareth Souza BritoIngeniería Ambiental, División de Ingenierías (CGT), Universidad de Guanajuato, Guanajuato, Gto., Mexico. emsbrito@gmail.com.ORCID http://orcid.org/0000-0003-0571-7636
Víctor Manuel Romero-NúñezIngeniería Ambiental, División de Ingenierías (CGT), Universidad de Guanajuato, Guanajuato, Gto., Mexico.
César Augusto CarettaDepartamento de Astronomía, División de Ciencias Naturales y Exactas (CGT), Universidad de Guanajuato, Guanajuato, Gto., Mexico.ORCID http://orcid.org/0000-0002-7369-0431
Pierre BertinEquipe Génomique, Structure et Traduction, Inst. Biologie Intégrative de la Cellule (I2BC) CNRS-UMR9198, Universitè Paris-Sud, 91405, Orsay Cedex, France.
Julio César Valerdi-NegrerosIngeniería Ambiental, División de Ingenierías (CGT), Universidad de Guanajuato, Guanajuato, Gto., Mexico.
Rémy GuyoneaudCNRS/Universitè de Pau et des Pays de l'Adour/E2S, Institut des Sciences Analytiques et de Physicochimie pour l'Environnement et les Matériaux, Environmental Microbiology Group, UMR 5254, 64000, Pau, France.ORCID http://orcid.org/0000-0001-6278-0872
Marisol Goñi-UrrizaCNRS/Universitè de Pau et des Pays de l'Adour/E2S, Institut des Sciences Analytiques et de Physicochimie pour l'Environnement et les Matériaux, Environmental Microbiology Group, UMR 5254, 64000, Pau, France.ORCID http://orcid.org/0000-0001-7694-6511
Universidad de Guanajuato · MXCentre National de la Recherche Scientifique · FRUniversité Paris-Sud · FR

Funding

Biometal Project ANR-CONACyT-188775Convocatoria de Apoyo a la Investigacion de la UG (DAIP) 0627/15
6 · The paper itself

Abstract

Vapor steam vents are prevailing structures on geothermal sites in which local geochemical conditions allow the development of extremophilic microorganisms. We describe the structure of the prokaryotic community able to grow on the walls and rocks of such microecosystems in two terrestrial Mexican volcanoes: Paricutín (PI and PII samples) and its satellite Sapichu (S sample). The investigated samples showed similar diversity indices, with few dominant OTUs (abundance > 1%): 21, 16 and 23, respectively for PI, PII and S. However, each steam vent showed a particular community profile: PI was dominated by photosynthetic bacteria (Cyanobacteria and Chloroflexia class), PII by Actinobacteria and Proteobacteria, and S by Ktedonobacteria class, Acidobacteria and Cyanobacteria phyla. Concerning the predicted metabolic potential, we found a dominance of cellular pathways, especially the ones for energy generation with metabolisms for sulfur respiration, nitrogen fixation, methanogenesis, carbon fixation, photosynthesis, and metals, among others. We suggest a different maturity stage for the three studied fumaroles, from the youngest (PI) to the oldest (S and PII), also influenced by the temperature and other geochemical parameters. Furthermore, four anaerobic strains were isolated, belonging to Clostridia class (Clostridium sphenoides, C. swellfunanium and Anaerocolumna cellulosilytica) and to Bacilli class (Paenibacillus azoreducens).

Indexed as

MicrobiotaVolcanic EruptionsBacteriaHydrothermal VentsPhylogenyAnaerobic bacteriaExtreme environmentMicrobial biodiversityPredictive metagenomics profilingVolcanic fumaroles

Identifiers

PMID30712189
OpenAlexW2914706840

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.