Evidence map›Paper›PMID 30709874›Full record

ArticleCold Spring Harbor molecular case studies2019

Missense variants in NOX1 and p22phox in a case of very-early-onset inflammatory bowel disease are functionally linked to NOD2.

Simone Lipinski, Britt-Sabina Petersen, Matthias Barann, Agnes Piecyk, Florian Tran, Gabriele Mayr, Marlene Jentzsch, Konrad Aden, Stephanie T Stengel, Ulrich C Klostermeier and 15 more

Open access · diamondAbstract readCase Reports
In one paragraph

Article in Cold Spring Harbor molecular case studies, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 4 institutions in 3 countries.

Simone Lipinski *Institute of Clinical Molecular Biology (IKMB), Christian-Albrechts-University, 24105 Kiel, Germany.ORCID 0000-0002-9322-7372
Britt-Sabina Petersen *Institute of Clinical Molecular Biology (IKMB), Christian-Albrechts-University, 24105 Kiel, Germany.ORCID 0000-0001-9022-9017
Matthias Barann *Institute of Clinical Molecular Biology (IKMB), Christian-Albrechts-University, 24105 Kiel, Germany.ORCID 0000-0002-6535-0533
Agnes PiecykInstitute of Clinical Molecular Biology (IKMB), Christian-Albrechts-University, 24105 Kiel, Germany.
Florian TranInstitute of Clinical Molecular Biology (IKMB), Christian-Albrechts-University, 24105 Kiel, Germany.ORCID 0000-0002-3735-9872
Gabriele MayrInstitute of Clinical Molecular Biology (IKMB), Christian-Albrechts-University, 24105 Kiel, Germany.
Marlene JentzschInstitute of Clinical Molecular Biology (IKMB), Christian-Albrechts-University, 24105 Kiel, Germany.
Konrad AdenInstitute of Clinical Molecular Biology (IKMB), Christian-Albrechts-University, 24105 Kiel, Germany.ORCID 0000-0003-3482-7316
Stephanie T StengelInstitute of Clinical Molecular Biology (IKMB), Christian-Albrechts-University, 24105 Kiel, Germany.
Ulrich C KlostermeierInstitute of Clinical Molecular Biology (IKMB), Christian-Albrechts-University, 24105 Kiel, Germany.
Vrunda ShethLife Technologies, Beverly, Massachusetts 01915, USA.
David EllinghausInstitute of Clinical Molecular Biology (IKMB), Christian-Albrechts-University, 24105 Kiel, Germany.
Tobias RauschEuropean Molecular Biology Laboratory (EMBL), Genome Biology Unit, 69117 Heidelberg, Germany.ORCID 0000-0002-5142-1310
Jan O KorbelEuropean Molecular Biology Laboratory (EMBL), Genome Biology Unit, 69117 Heidelberg, Germany.ORCID 0000-0002-5371-5320
Michael NothnagelInstitute of Medical Informatics and Statistics (IMIS), Christian-Albrechts University, 24105 Kiel, Germany.ORCID 0000-0001-8305-7114
Michael KrawczakInstitute of Medical Informatics and Statistics (IMIS), Christian-Albrechts University, 24105 Kiel, Germany.ORCID 0000-0003-2603-1502
Christian GilissenDepartment of Human Genetics, Donders Institute for Brain, Cognition and Behavior, Radboud University Medical Center, Nijmegen 6525, The Netherlands.ORCID 0000-0003-1693-9699
Joris A VeltmanDepartment of Human Genetics, Donders Institute for Brain, Cognition and Behavior, Radboud University Medical Center, Nijmegen 6525, The Netherlands.ORCID 0000-0002-3218-8250
Michael ForsterInstitute of Clinical Molecular Biology (IKMB), Christian-Albrechts-University, 24105 Kiel, Germany.ORCID 0000-0002-3284-2558
Peter ForsterMurray Edwards College, University of Cambridge, Cambridge CB3 0DF, United Kingdom.
Clarence C LeeDepartment of General Internal Medicine, Christian-Albrechts-University, University Hospital Schleswig-Holstein, 24105 Kiel, Germany.ORCID 0000-0001-6912-4800
Annette Fritscher-RavensDepartment of General Internal Medicine, Christian-Albrechts-University, University Hospital Schleswig-Holstein, 24105 Kiel, Germany.
Stefan Schreiber *Institute of Clinical Molecular Biology (IKMB), Christian-Albrechts-University, 24105 Kiel, Germany.ORCID 0000-0003-1065-5003
Andre Franke *Institute of Clinical Molecular Biology (IKMB), Christian-Albrechts-University, 24105 Kiel, Germany.ORCID 0000-0003-1530-5811
Philip Rosenstiel *Institute of Clinical Molecular Biology (IKMB), Christian-Albrechts-University, 24105 Kiel, Germany.ORCID 0000-0002-9692-8828
Christian-Albrechts-Universität zu Kiel · DEEuropean Molecular Biology Laboratory · DERadboud University Nijmegen · NLUniversity of Cambridge · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Whole-genome and whole-exome sequencing of individual patients allow the study of rare and potentially causative genetic variation. In this study, we sequenced DNA of a trio comprising a boy with very-early-onset inflammatory bowel disease (veoIBD) and his unaffected parents. We identified a rare, X-linked missense variant in the NAPDH oxidase

Indexed as

Mutation, MissenseCell Line, TumorChromosomes, Human, XExome SequencingHomozygoteHumansInflammatory Bowel DiseasesMaleNADPH Oxidase 1NADPH OxidasesNod2 Signaling Adaptor ProteinPolymorphism, Single NucleotideWhole Genome SequencingCYBA protein, humanNADPH Oxidase 1NADPH OxidasesNOD2 protein, humanNod2 Signaling Adaptor ProteinNOX1 protein, humaninflammation of the large intestine

Identifiers

PMID30709874
PMCPMC6371741
OpenAlexW2913517650

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.