Evidence map›Paper›PMID 30707917›Full record

ArticleJournal of neuroscience methods2019

Delay differential analysis for dynamical sleep spindle detection.

Aaron L Sampson, Claudia Lainscsek, Christopher E Gonzalez, István Ulbert, Orrin Devinsky, Dániel Fabó, Joseph R Madsen, Eric Halgren, Sydney S Cash, Terrence J Sejnowski

Abstract read
In one paragraph

Article in Journal of neuroscience methods, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Decoding imagined speech with delay differential analysis.Frontiers in human neuroscience · 2024
    Article
  3. Article
  4. Article
  5. Quantifying Phase-Amplitude Modulation in Neural Data.... Annual Conference on Information Sciences and Systems. Annual Conference on Information Sciences and Systems · 2023
    Article
  6. Article
  7. Nonlinear dynamics underlying sensory processing dysfunction in schizophrenia.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 2 countries.

Aaron L SampsonComputational Neurobiology Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, USA; Neurosciences Graduate Program, University of California San Diego, La Jolla, CA 92093, USA. Electronic address: asampson@ucsd.edu.
Claudia LainscsekComputational Neurobiology Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, USA; Institute for Neural Computation, University of California San Diego, La Jolla, CA 92093, USA.
Christopher E GonzalezComputational Neurobiology Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, USA; Neurosciences Graduate Program, University of California San Diego, La Jolla, CA 92093, USA.
István UlbertInstitute of Cognitive Neuroscience and Psychology, Research Centre for Natural Sciences, Hungarian Academy of Sciences, Magyar tudósok körútja 2, H-1117 Budapest, Hungary; Faculty of Information Technology and Bionics, Pázmány Péter Catholic University, H-1083 Budapest, Hungary.
Orrin DevinskyNew York University Comprehensive Epilepsy Center, New York, NY 10016, USA.
Dániel FabóEpilepsy Centrum, National Institute of Clinical Neurosciences, Budapest, Hungary.
Joseph R MadsenDepartments of Neurosurgery, Boston Children's Hospital and Harvard Medical School, Boston, MA 02115, USA.
Eric HalgrenDepartments of Radiology and Neurosciences, University of California San Diego, La Jolla, CA 92093, USA.
Sydney S CashDepartment of Neurology, Massachusetts General Hospital and Harvard Medical School, Harvard University, Boston, MA 02114, USA.
Terrence J SejnowskiComputational Neurobiology Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, USA; Institute for Neural Computation, University of California San Diego, La Jolla, CA 92093, USA; Division of Biological Sciences, University of California San Diego, La Jolla, CA 92093, USA.
University of California, San Diego · USSalk Institute for Biological Studies · USBoston Children's Hospital · USInstitute of Cognitive Neuroscience and Psychology · HUMassachusetts General Hospital · USNew York University · USOrszágos Idegsebészeti Tudományos Intézet · HU

Funding

Neurosciences Graduate Training ProgramT32NS061847 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Brenda L Bloodgood · 2008 to 2026
$7.7M
TRAINING PROGRAM IN COGNITIVE NEUROSCIENCET32MH020002 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SEJNOWSKI, TERRENCE J · 1999 to 2020
$6.1M
CRCNS: Integrated Empirical and Multiscale Modeling of Human Sleep SpindlesR01EB009282 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SEJNOWSKI, TERRENCE J · 2008 to 2016
$3.7M
Multiscale modeling and large-scale recordings of trauma-induced epileptogenesisR01NS104368 · NINDS · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI SEJNOWSKI, TERRENCE J · 2018 to 2022
$3.1M
Nonlinear Causal Analysis of Neural SignalsR01EB026899 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SEJNOWSKI, TERRENCE J · 2018 to 2020
$1.0M
Delay Differential Analysis of Sleep Spindles and a Schizophrenia BiomarkerF99NS105204 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SAMPSON, AARON L · 2018 to 2018
$38k
NIBIB NIH HHS R01 EB009282NIBIB NIH HHS R01 EB026899NIMH NIH HHS T32 MH020002NINDS NIH HHS F99 NS105204NINDS NIH HHS R01 NS104368NINDS NIH HHS T32 NS061847
6 · The paper itself

Abstract

backgroundSleep spindles are involved in memory consolidation and other cognitive functions. Numerous automated methods for detection of spindles have been proposed; most of these rely on spectral analysis in some form. However, none of these approaches are ideal, and novel approaches to the problem could provide additional insights. NEW

methodHere, we apply delay differential analysis (DDA), a time-domain technique based on nonlinear dynamics to detect sleep spindles in human intracranial sleep data, including laminar electrode, stereoelectroencephalogram (sEEG), and electrocorticogram (ECoG) recordings.

resultsWe show that this approach is computationally fast, generalizable, requires minimal preprocessing, and provides excellent agreement with human scoring. COMPARISON WITH EXISTING

methodsWe compared the method with established methods on a set of intracranial recordings and this method provided the highest agreement with human expert scoring when evaluated with F

conclusionsThis additional, non-frequency-based perspective could prove particularly useful for certain atypical spindles, or identifying spindles of different types.

Indexed as

Models, TheoreticalAdultBrain WavesDrug Resistant EpilepsyElectrocorticographyHumansSleep Stages

Identifiers

PMID30707917
PMCPMC6447286
OpenAlexW2914695196

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.