Evidence map›Paper›PMID 30707099›Full record

ArticleJournal of medical Internet research2019

An Integrated Influenza Surveillance Framework Based on National Influenza-Like Illness Incidence and Multiple Hospital Electronic Medical Records for Early Prediction of Influenza Epidemics: Design and Evaluation.

Cheng-Yi Yang, Ray-Jade Chen, Wan-Lin Chou, Yuarn-Jang Lee, Yu-Sheng Lo

Erratum issuedAbstract read
In one paragraph

Article in Journal of medical Internet research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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  7. Epidemic tracking and forecasting: Lessons learned from a tumultuous year.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  8. Article
  9. Article
  10. Socioeconomic bias in influenza surveillance.PLoS computational biology · 2020
    Article
  11. Unlocking the Potential of Electronic Health Records for Health Research.International journal of population data science · 2020
    Article
  12. Article
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  14. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Cheng-Yi Yang *Graduate Institute of Biomedical Informatics, Taipei Medical University, Taipei, Taiwan.ORCID 0000-0002-7407-0074
Ray-Jade Chen *Department of Surgery, School of Medicine, College of Medicine, Taipei Medical University, Taipei, Taiwan.ORCID 0000-0002-4666-6364
Wan-Lin ChouTaipei Medical University Hospital, Taipei, Taiwan.ORCID 0000-0001-9454-6343
Yuarn-Jang LeeDivision of Infectious Disease, Department of Internal Medicine, Taipei Medical University Hospital, Taipei, Taiwan.ORCID 0000-0003-1077-0300
Yu-Sheng LoGraduate Institute of Biomedical Informatics, Taipei Medical University, Taipei, Taiwan.ORCID 0000-0002-6915-509X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundInfluenza is a leading cause of death worldwide and contributes to heavy economic losses to individuals and communities. Therefore, the early prediction of and interventions against influenza epidemics are crucial to reduce mortality and morbidity because of this disease. Similar to other countries, the Taiwan Centers for Disease Control and Prevention (TWCDC) has implemented influenza surveillance and reporting systems, which primarily rely on influenza-like illness (ILI) data reported by health care providers, for the early prediction of influenza epidemics. However, these surveillance and reporting systems show at least a 2-week delay in prediction, indicating the need for improvement.

objectiveWe aimed to integrate the TWCDC ILI data with electronic medical records (EMRs) of multiple hospitals in Taiwan. Our ultimate goal was to develop a national influenza trend prediction and reporting tool more accurate and efficient than the current influenza surveillance and reporting systems.

methodsFirst, the influenza expertise team at Taipei Medical University Health Care System (TMUHcS) identified surveillance variables relevant to the prediction of influenza epidemics. Second, we developed a framework for integrating the EMRs of multiple hospitals with the ILI data from the TWCDC website to proactively provide results of influenza epidemic monitoring to hospital infection control practitioners. Third, using the TWCDC ILI data as the gold standard for influenza reporting, we calculated Pearson correlation coefficients to measure the strength of the linear relationship between TMUHcS EMRs and regional and national TWCDC ILI data for 2 weekly time series datasets. Finally, we used the Moving Epidemic Method analyses to evaluate each surveillance variable for its predictive power for influenza epidemics.

resultsUsing this framework, we collected the EMRs and TWCDC ILI data of the past 3 influenza seasons (October 2014 to September 2017). On the basis of the EMRs of multiple hospitals, 3 surveillance variables, TMUHcS-ILI, TMUHcS-rapid influenza laboratory tests with positive results (RITP), and TMUHcS-influenza medication use (IMU), which reflected patients with ILI, those with positive results from rapid influenza diagnostic tests, and those treated with antiviral drugs, respectively, showed strong correlations with the TWCDC regional and national ILI data (r=.86-.98). The 2 surveillance variables-TMUHcS-RITP and TMUHcS-IMU-showed predictive power for influenza epidemics 3 to 4 weeks before the increase noted in the TWCDC ILI reports.

conclusionsOur framework periodically integrated and compared surveillance data from multiple hospitals and the TWCDC website to maintain a certain prediction quality and proactively provide monitored results. Our results can be extended to other infectious diseases, mitigating the time and effort required for data collection and analysis. Furthermore, this approach may be developed as a cost-effective electronic surveillance tool for the early and accurate prediction of epidemics of influenza and other infectious diseases in densely populated regions and nations.

Indexed as

Electronic Health RecordsEpidemicsHumansIncidenceInfluenza, HumanRetrospective Studieselectronic disease surveillanceelectronic health recordselectronic medical recordsepidemicsinfluenzainfluenza surveillancepublic health

Identifiers

PMID30707099
PMCPMC6376337

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.