Evidence map›Paper›PMID 30706702›Full record

ArticleMolecular genetics & genomic medicine2019

Prenatal cell-free DNA screening for fetal aneuploidy in pregnant women at average or high risk: Results from a large US clinical laboratory.

Carrie Guy, Farnoosh Haji-Sheikhi, Charles M Rowland, Ben Anderson, Renius Owen, Felicitas L Lacbawan, Damian P Alagia

Abstract readEvaluation Study
In one paragraph

Article in Molecular genetics & genomic medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Carrie GuyQuest Diagnostics Nichols Institute, San Juan Capistrano, California.ORCID 0000-0002-3349-6597
Farnoosh Haji-SheikhiQuest Diagnostics Nichols Institute, San Juan Capistrano, California.
Charles M RowlandQuest Diagnostics Nichols Institute, San Juan Capistrano, California.
Ben AndersonQuest Diagnostics Nichols Institute, San Juan Capistrano, California.
Renius OwenQuest Diagnostics Nichols Institute, San Juan Capistrano, California.
Felicitas L LacbawanQuest Diagnostics Nichols Institute, San Juan Capistrano, California.
Damian P AlagiaQuest Diagnostics Nichols Institute, San Juan Capistrano, California.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWe evaluated the performance of a cell-free DNA (cfDNA) prenatal screening assay for trisomies 21, 18, and 13, and sex chromosome aneuploidies (SCAs) among a population of pregnant women that included both those at average and high risk.

methodsSpecimen collection, cfDNA extraction, massively parallel sequencing, and bioinformatics analysis were conducted per laboratory protocol. Assay results, concordance with pregnancy outcomes, and performance characteristics were evaluated.

resultsA total 75,658 specimens from 72,176 individual pregnant women were received. Technical reasons accounted for 288 (0.4% of all received samples) tests not performed. In the final analysis cohort (N = 69,794), 13% of pregnancies were considered at average risk and 87% at high risk. Mean gestational age at specimen collection was 15.1 weeks. Of the 69,794 unique pregnancies, 1,359 (1.9%) had positive test results. Among the results with confirmed outcomes, PPV for trisomies 21, 18, and 13 was 98.1%, 88.2%, and 59.3%, respectively; the PPV was 69.0% for SCAs and 75.0% for microdeletions. Overall, PPV was 87.2%, sensitivity was 97.9%, and specificity was 99.9%.

conclusionThis cfDNA prenatal screening assay provides highly accurate discrimination between affected and unaffected pregnancies among a population of pregnant women at average and high risk for fetal genetic abnormalities.

Indexed as

AneuploidyAdultCell-Free Nucleic AcidsChromosome DisordersFemaleGenetic TestingHumansPregnancyPrenatal DiagnosisReproducibility of ResultsSequence Analysis, DNACell-Free Nucleic AcidscfDNA prenatal screening assayfetal aneuploidygenetic counselingmicrodeletionmicroduplicationpositive predictive valuesex chromosome aneuploidytrisomy 13trisomy 18trisomy 21

Identifiers

PMID30706702
PMCPMC6418367

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.