Evidence map›Paper›PMID 30706654›Full record

ArticleMicrobial biotechnology2019

Identification of three podoviruses infecting Klebsiella encoding capsule depolymerases that digest specific capsular types.

Yi-Jiun Pan, Tzu-Lung Lin, Yi-Yin Chen, Peng-Hsuan Lai, Yun-Ting Tsai, Chun-Ru Hsu, Pei-Fang Hsieh, Yi-Tsung Lin, Jin-Town Wang

Open access · goldAbstract read
In one paragraph

Article in Microbial biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 1 pooled it
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 1 synthesis or guideline pooled it, 66 citations in OpenAlex.

  1. Pooled it
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  5. Review
  6. Article
  7. Glycoconjugate Vaccines Against Nosocomial Klebsiella pneumoniae Infections.Advances in experimental medicine and biology · 2026
    Article
  8. Article
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  17. Characterization of four novel bacteriophages targeting multi-drug resistantFrontiers in cellular and infection microbiology · 2024
    Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 1 country.

Yi-Jiun PanDepartment of Microbiology and Immunology, School of Medicine, China Medical University, Taichung, Taiwan.
Tzu-Lung LinDepartment of Medical Biotechnology and Laboratory science, College of Medicine, Chang Gung University, Taoyuan, Taiwan.
Yi-Yin ChenDepartment of Pediatrics, College of Medicine, Chang Gung Children's Hospital, Chang Gung Memorial Hospital, Chang Gung University, Taoyuan, Taiwan.
Peng-Hsuan LaiDepartment of Microbiology and Immunology, School of Medicine, China Medical University, Taichung, Taiwan.
Yun-Ting TsaiDepartment of Microbiology and Immunology, School of Medicine, China Medical University, Taichung, Taiwan.
Chun-Ru HsuDepartment of Medical Research, E-Da Hospital, Kaohsiung, Taiwan.
Pei-Fang HsiehDepartment of Microbiology, National Taiwan University College of Medicine, Taipei, Taiwan.
Yi-Tsung LinDivision of Infectious Diseases, Department of Medicine, Taipei Veterans General Hospital, Taipei, Taiwan.
Jin-Town WangDepartment of Microbiology, National Taiwan University College of Medicine, Taipei, Taiwan.ORCID 0000-0002-2522-7805
China Medical University · TWNational Taiwan University · TWChang Gung University · TWChang Gung University of Science and Technology · TWE-Da Hospital · TWTaipei Veterans General Hospital · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Klebsiella pneumoniae is an important human pathogen causing opportunistic nosocomial and community-acquired infections. A major public health concern regarding K. pneumoniae is the increasing incidence of multidrug-resistant strains. Here, we isolated three novel Klebsiella bacteriophages, KN1-1, KN3-1 and KN4-1, which infect KN1, KN3 and K56, and KN4 types respectively. We determined their genome sequences and conducted a comparative analysis that revealed a variable region containing capsule depolymerase-encoding genes. Recombinant depolymerase proteins were produced, and their enzymatic activity and specificity were evaluated. We identified four capsule depolymerases in these phages that could only digest the capsule types of their respective hosts. Our results demonstrate that the activities of these capsule depolymerases were correlated with the host range of each phage; thus, the capsule depolymerases are host specificity determinants. By generating a capsule mutant, we demonstrate that capsule was essential for phage adsorption and infection. Further, capsule depolymerases can enhance bacterial susceptibility to serum killing. The discovery of these phages and depolymerases lays the foundation for the typing of KN1, KN3, KN4 and K56 Klebsiella and could be useful alternative therapeutics for the treatment of K. pneumoniae infections.

Indexed as

Bacterial CapsulesBacteriophagesComputational BiologyGenome, ViralGenomicsGlycoside HydrolasesHost SpecificityKlebsiellaPodoviridaeSequence Analysis, DNASewageSubstrate SpecificityViral ProteinsVirus AttachmentVirus Internalizationcapsular-polysaccharide galactohydrolaseGlycoside HydrolasesSewageViral Proteins

Identifiers

PMID30706654
PMCPMC6465236
OpenAlexW2914159229

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.